Microtus fortis (reed vole): 126503627
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Entry
126503627 CDS
T08493
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mfot
Microtus fortis (reed vole)
Pathway
mfot04064
NF-kappa B signaling pathway
mfot04622
RIG-I-like receptor signaling pathway
mfot04623
Cytosolic DNA-sensing pathway
mfot05160
Hepatitis C
mfot05161
Hepatitis B
mfot05162
Measles
mfot05164
Influenza A
mfot05168
Herpes simplex virus 1 infection
mfot05169
Epstein-Barr virus infection
mfot05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
126503627
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
126503627
04623 Cytosolic DNA-sensing pathway
126503627
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
126503627
05160 Hepatitis C
126503627
05171 Coronavirus disease - COVID-19
126503627
05164 Influenza A
126503627
05162 Measles
126503627
05168 Herpes simplex virus 1 infection
126503627
05169 Epstein-Barr virus infection
126503627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mfot04054
]
126503627
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126503627
Pattern recognition receptors [BR:
mfot04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
126503627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
Motif
Other DBs
NCBI-GeneID:
126503627
NCBI-ProteinID:
XP_050001402
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MTAEQRQNLRAFRDYVRKTLDPTYILSYMGPWLQDEVVQFIQAEKNNKGPMEAASLFLQY
LLQLQTEGWFRAFLDALYSAGYCGLYEAIESWDFQKLEKLEEHRLLLQRLQPEFKTRINP
TDILPELSECLINQECEEIRQICFTKGMMAGAEKMVECLLRSDKENWPKVLKLALEKENS
TFSELWIVEGFKMVESKAVEDDDMETSSIQIFIQEEPECQVLSQDPCPPSEASSNNFNGP
LKPRNYQLELALPAEKGKNAIICAPTGCGKTFVSLLICEHHLKTSPHGRKGKVVFFANQI
PVYEQQATVFSRYFERLGYSVAGVSGATTDNVSMQDIIENKDIIILTPQILVNSLNDGTI
PSLSVFTLMIFDECHNTSKHHPYNQIMFRYLDHKLGGLPGPLPQVVGLTASVGVGDAKTV
KEAMLHICKLCAALDTSVIATVRDNVEELEQFVYKPQKFFRKVESRTTNTFKSIISQLMK
ETEGLAKNVSEELGKLFQIQNREFGTQRYEQWIVAVHKACMVFQMPDKEKESSICRALFL
YTSHLRKYNDALIISEHAQMKDALNYLKAFFHDVKNAAFDETEQDLTRRFEEKLEELEEV
SKDPSNENPKLRDLYLILQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGI
LTGRGKTNQATGMTLPAQKCALETFRASGDNNILIATSVADEGIDIAQCNLVILYEYVGN
VIKMIQTRGRGRARDSKCFLLTSNAEVIEKEKVNMFKEKIMNESISMLQAWDEMKFEKTV
QRIQLDEKFIRDSQRKPQPAPDKENKKLLCGKCKAFACYTADIRVVEKSHYTVLGNAFKE
RFVSKPHPKPKIYDSFEKKAKIFCAIQKCCHDWGIHVKYKTFEIPVIKIESFVVEDIASG
VQRRHAKWKDFHFERIQFDPAEMPL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaacagcggcagaatctgcgagccttcagagactatgtcagaaagactctg
gaccccacctacatcctcagctacatgggtccctggctccaggatgaggtggtccagttc
atccaggctgagaaaaacaacaagggccccatggaagctgcctccctgttcctccagtac
ctgctgcagctgcagacggaaggctggttccgggcctttttggatgccctgtacagtgca
ggttactgtggactttatgaagccattgaaagttgggatttccaaaaacttgaaaagtta
gaggaacacagattacttttacagcgtttacagccagaatttaagaccagaatcaaccca
acagatatccttcctgaattgtctgaatgcttgattaatcaggaatgtgaagaaatcaga
cagatctgcttcaccaaagggatgatggcaggtgcggagaagatggttgaatgtcttctc
agatcggataaggagaactggcccaaggttttgaaattggctttggagaaagaaaacagc
acgttcagtgaactgtggattgttgaaggtttcaaaatggtcgagagtaaagctgttgaa
gatgatgacatggagacgtccagcatacagattttcatacaagaggagccagaatgccag
gttctcagccaggacccctgcccaccttcagaagcatcttctaataattttaacggcccg
ttgaaaccaagaaactaccaactggagcttgctctgcccgccgagaaagggaaaaatgca
ataatatgtgctccgactggttgtgggaaaacctttgtgtcacttcttatatgtgagcat
catctgaaaacatcgccacatggacgaaaagggaaagtggtctttttcgctaatcaaatt
cctgtgtatgaacagcaggcaactgtgttctcacgctattttgaaagacttgggtacagc
gtagcgggcgtttctggggcaacgactgataatgtctcaatgcaggacattatcgagaac
aaagacatcatcatcctcacaccccagattcttgtgaacagtctcaacgatggaaccatc
ccctcactgtctgtcttcaccctgatgatctttgacgaatgccataacaccagtaaacac
cacccgtacaatcagatcatgttccgatacctagatcacaaactcggagggttgccaggc
ccactgcctcaggtcgtcggactgaccgcctcagtgggtgttggagacgccaaaactgta
aaggaagccatgctgcacatctgcaaactctgcgccgcccttgacacgtccgtgatcgcc
acggtcagagacaacgtggaggaactggagcagtttgtttataaaccccagaaatttttc
aggaaggtggaatcacggactaccaacacatttaagtccatcatatctcagctgatgaag
gagacagagggactggcaaagaatgtctccgaggaactcggaaaattatttcagattcaa
aacagagaatttggcacgcagagatacgaacagtggatcgttgccgttcacaaagcctgc
atggtgtttcagatgccggacaaggagaaggagagcagcatttgcagagcgctctttctg
tacacctcccatttgcggaaatacaacgatgctctcatcatcagtgagcatgcccagatg
aaagatgctcttaattacctcaaagccttcttccacgatgtcaaaaatgcagcatttgat
gagaccgagcaagatcttacgcggaggtttgaagaaaagctggaggaactagaagaagtt
tccaaagatcccagcaacgagaatcctaaactcagagacctctacctgatcttacaagaa
gagtaccacctaaagccggagaccaaaaccattctttttgtgaaaaccagagcacttgtg
gatgctttaaagaaatggattgaagaaaatcctgcactcagctttctaaagcctggtata
ttgactggacgtggcaaaacaaaccaggcaacagggatgaccctcccggcacagaagtgt
gcactggaaacgttcagagccagcggggataacaacatcctgattgctacctcggtggct
gacgaaggcattgacattgctcagtgcaacctggtcatcttgtacgagtatgtgggcaac
gtcatcaaaatgatccaaaccagaggcaggggaagagcaagagacagcaagtgcttcctc
ctgaccagcaatgctgaagtcatcgagaaagaaaaggtgaacatgttcaaggaaaaaata
atgaatgaatccatttcaatgcttcaggcgtgggatgaaatgaaatttgagaaaacggtt
caacgcatacagttggatgaaaaatttatcagagatagtcaacgcaagccacaaccggcc
cctgataaggaaaataagaaactgctgtgtgggaaatgcaaggcctttgcgtgctacacg
gctgacatccgagtggtggagaaatcgcactacactgtgcttggaaatgcctttaaggag
cgctttgtgtctaagccgcaccctaagccgaagatctacgacagtttcgaaaagaaagca
aagatattctgtgccatacagaagtgctgccacgactgggggatccatgtgaaatataag
acgttcgagattcccgtcataaaaatcgaaagttttgtggtggaagatatcgcaagtgga
gttcagaggcggcatgcaaagtggaaggactttcattttgaaagaatacagtttgaccct
gcagaaatgcccttatga
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