Alexandromys fortis (reed vole): 126504640 Help Entry 126504640         CDS       T08493                                  Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism mfot  Alexandromys fortis (reed vole) Pathway mfot04010   MAPK signaling pathway mfot04064   NF-kappa B signaling pathway mfot04120   Ubiquitin mediated proteolysis mfot04140   Autophagy - animal mfot04144   Endocytosis mfot04380   Osteoclast differentiation mfot04517   IgSF CAM signaling mfot04620   Toll-like receptor signaling pathway mfot04621   NOD-like receptor signaling pathway mfot04622   RIG-I-like receptor signaling pathway mfot04657   IL-17 signaling pathway mfot04722   Neurotrophin signaling pathway mfot04936   Alcoholic liver disease mfot05132   Salmonella infection mfot05133   Pertussis mfot05135   Yersinia infection mfot05140   Leishmaniasis mfot05142   Chagas disease mfot05145   Toxoplasmosis mfot05152   Tuberculosis mfot05160   Hepatitis C mfot05161   Hepatitis B mfot05162   Measles mfot05168   Herpes simplex virus 1 infection mfot05169   Epstein-Barr virus infection mfot05170   Human immunodeficiency virus 1 infection mfot05171   Coronavirus disease - COVID-19 mfot05200   Pathways in cancer mfot05222   Small cell lung cancer mfot05235   PD-L1 expression and PD-1 checkpoint pathway in cancer mfot05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:mfot00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     126504640  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     126504640    04064 NF-kappa B signaling pathway     126504640   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     126504640  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     126504640    04140 Autophagy - animal     126504640  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     126504640    04621 NOD-like receptor signaling pathway     126504640    04622 RIG-I-like receptor signaling pathway     126504640    04657 IL-17 signaling pathway     126504640   09156 Nervous system    04722 Neurotrophin signaling pathway     126504640   09158 Development and regeneration    04380 Osteoclast differentiation     126504640  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     126504640    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     126504640   09162 Cancer: specific types    05222 Small cell lung cancer     126504640   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     126504640    05161 Hepatitis B     126504640    05160 Hepatitis C     126504640    05171 Coronavirus disease - COVID-19     126504640    05162 Measles     126504640    05168 Herpes simplex virus 1 infection     126504640    05169 Epstein-Barr virus infection     126504640   09171 Infectious disease: bacterial    05132 Salmonella infection     126504640    05135 Yersinia infection     126504640    05133 Pertussis     126504640    05152 Tuberculosis     126504640   09174 Infectious disease: parasitic    05145 Toxoplasmosis     126504640    05140 Leishmaniasis     126504640    05142 Chagas disease     126504640   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     126504640   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     126504640  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mfot04131]     126504640    04121 Ubiquitin system [BR:mfot04121]     126504640 Enzymes [BR:mfot01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      126504640 Membrane trafficking [BR:mfot04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     126504640 Ubiquitin system [BR:mfot04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     126504640 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Sina_ZnF TRAF3_RING RING_XB3-XBAT31 PspA_IM30 DUF4455 DUF16 zf-RING_11 U-box Rhabdo_ncap_2 CCDC18_1st UPF0242 Spc29 CEP162_coil_mid Plectin_PPL PKcGMP_CC Motif Other DBs NCBI-GeneID:  126504640 NCBI-ProteinID:  XP_050003024 LinkDB All DBs Position Unknown AA seq 530 aa AA seqDB search MSLLNCENSCGSSQSSSDCCAAMAASCSAAMKDDSVSGSASTGNFSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCLQKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQFNIHVME DCPRRQVSCVNCAVSMPFEEKEIHDQTCPLANIICEYCGTILIREQMPNHYDLDCPTAPI PCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHDVNLALRTCDTSSPSRGCCPED PNYEETIKQLESRLVRQDHQIRELTAKMETQSIYVNELKRTIRTLEDKVAEMEAQQCNGI YIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH TMQGDYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFG YVTFMHLEALRQGTFVKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt atgagtctgttaaactgtgaaaacagctgtgggtccagccagtcctcaagtgactgctgt gctgccatggccgcctcctgcagtgctgcgatgaaagatgacagtgtgagtgggtccgcc agcacggggaacttctccagctcctttatggaggagatccagggatacgatgtggagttt gacccacctttggagagcaagtatgagtgccccatctgcttgatggcgttacgggaagca gtgcaaacaccatgtggccacaggttctgcaaagcctgcatcatcaaatccataagggat gcaggtcacaagtgtccagttgacaatgaaatactgctggaaaatcaactgtttcctgac aattttgcaaagcgagagatcctttccctaacagtaaaatgcccaaataaaggctgtttg cagaagatggaactgagacacctcgaggatcaccaagcacattgtgaatttgctcttatg aattgtccccaatgtcaacgtcctttccaaaagtgccagtttaatatacatgttatggag gattgtcccaggagacaggtgtcttgtgtaaactgtgctgtgtccatgccatttgaagaa aaagagatccatgatcagacttgtcctttggcaaatatcatctgtgaatactgtggtaca atcctcatcagagaacagatgcctaatcattacgatctggactgcccgacagcaccaatc ccttgcaccttcagtgtttttggttgtcatgagaagatgcagagaaatcacttggcgcga cacctgcaagagaatacccagttgcacatgagactattggcccaggctgttcatgatgta aaccttgctttgcgtacatgtgatacttcctctccgtcccggggatgttgtccagaggac ccaaattatgaggaaactatcaaacagttggaaagtcgcctagtaagacaggaccatcaa atccgggaactgactgccaaaatggaaactcagagtatatatgtaaatgagctcaaacgg accattcgaacccttgaggacaaagttgctgaaatggaagcacagcagtgtaatgggatt tacatttggaagattggcaactttgggatgcacttgaaatcccaagaagaggaaaaacct gttgtcattcatagcccaggattctacacaggcagacctgggtacaagctgtgcatgcgc ctgcaccttcagttacccactgctcagcgctgtgcaaactatatatccctgtttgtccac acaatgcaaggagattatgacagtcatctcccctggcccttccagggcaccatacgcctt acaattcttgatcagtctgaagcagtaataaggcaaaaccacgaagaggtcatggatgct aaaccagagctgcttgcttttcagcgtcccacaatcccacggaaccccaaaggttttggc tacgtaacatttatgcatctggaagccttaagacaggggaccttcgttaaggatgataca ttattagtgcgctgtgaagtctctacccgctttgacatgggtggccttcggaaggagggt ttccagccacgaagtactgatgcaggagtctag

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