Alexandromys fortis (reed vole): 126508151
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Entry
126508151 CDS
T08493
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126508151
09123 Folding, sorting and degradation
03018 RNA degradation
126508151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126508151
03041 Spliceosome [BR:
mfot03041
]
126508151
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126508151
mRNA degradation factors
5'-3' decay
Lsm complex
126508151
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126508151
Complex C
U2 snRNP components
126508151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
126508151
NCBI-ProteinID:
XP_050009126
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtagatcagcaacagaccaccaatactgtagaggagcccctggatctc
atcaggctcagtttggatgagcgaatttatgtgaagatgagaaacgacagagagcttcga
ggcagattacatgcttatgatcaacatttaaatatgatcctgggagatgtggaagaaact
gtgacaacaatagagattgatgaagagacgtatgaggagatatataaatcaacaaaacgg
aacatccccatgctcttcgttcggggagatggtgttgttctagttgcccctccattgaga
gtcggctga
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integrated database retrieval system
