Alexandromys fortis (reed vole): 126512468
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Entry
126512468 CDS
T08493
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126512468
09123 Folding, sorting and degradation
03018 RNA degradation
126512468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126512468
03041 Spliceosome [BR:
mfot03041
]
126512468
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126512468
mRNA degradation factors
5'-3' decay
Lsm complex
126512468
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126512468
Complex C
U2 snRNP components
126512468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
DUF150_C
YfkB
LNS2
Motif
Other DBs
NCBI-GeneID:
126512468
NCBI-ProteinID:
XP_050016217
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKECIEAGVMAGHTGV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtagatcagcaacagaccaccaatactgtagaggagcccctggatctc
atcaggctcagtttggatgagcgaatttatgtgaagatgagaaacgacagagagcttcga
ggcagattacatgcttatgatcaacatttaaatatgatcctgggagatgtggaagaaact
gtgacaacaatagagattgatgaagagacgtatgaggagatatataaagaatgcatagaa
gcaggtgtgatggcagggcacactggagtctga
DBGET
integrated database retrieval system
