Microtus fortis (reed vole): 126513704
Help
Entry
126513704 CDS
T08493
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
mfot
Microtus fortis (reed vole)
Pathway
mfot04022
cGMP-PKG signaling pathway
mfot04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
126513704
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126513704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126513704
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126513704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
126513704
NCBI-ProteinID:
XP_050018178
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSQSPGFVARRGGSPLVAPGAGARRNESQDYLLMDELGDNGCPQLPLPPYGYYPSFRGNE
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
NHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCTECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDAETRQPGDLGRP
NLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLA
LIYWCAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAR
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIIDANDTLKDLTTVPLGDNVKYYNLARIKWDPSDPQIISEGLYAI
AVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIG
AKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLN
MLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFK
KWMSELVQSHKKGFQEDAEMNKRNEEKKFGILGSHEDLSKFSLDKNQLSHKQSSIRSSED
FHLNSFSSPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEK
SQNTEDLAELVRKLGERLSLQSKAEESHR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagccccgggttcgtggcccggaggggcgggtctccgctggtagcccctgga
gccggtgcgcggcgcaacgagagccaggactatctgctgatggacgagctgggagacaac
ggctgcccgcagctcccgctgccaccctatggctactaccccagcttccggggtaatgaa
aacagactgactcaccggcggcagacagttcttcgtgagaagggaagaaggttggctaat
agaggaccagcgtacatgtttaatgatcactcgacaagcctgtctattgaggaggaacgc
tttctagatgcagccgaatatggcaacatcccagtggtgcggaagatgctggaggagtgc
ctatccctcaacgtcaactgtgtggactacatgggccagaatgccctgcagttggcagtg
gccaatgagcacctggaaattacagagctgttgctcaagaaggaaaacttgtctcgcgtt
ggggacgctttactcttagctatcagtaaaggttatgtgcgcattgtggaggcaatcctc
aaccacccagcttttgctgaaggcaagaggttagccacaagccccagccagtctgaactc
cagcaagatgacttttatgcctatgatgaagatgggactcggttctcccatgatgtgaca
ccaatcattctggctgcccactgccaggaatatgaaattgtgcacacgcttctgagaaag
ggtgctcggattgaacggcctcatgattacttctgcaagtgtacagaatgcagccagaaa
cagaagcatgactcattcagtcattccagatccaggattaatgcctacaaaggcctggca
agcccagcgtacctgtcgttgtccagtgaggacccagtcatgacagctttagaactcagc
aatgagctggccgtgcttgccaacatagagaaagaattcaagaatgactataggaagctg
tccatgcagtgcaaagatttcgtggttggtctcctggatctctgcagaaacacggaagaa
gtggaggccatcctgaacggggatgcagagactcgccagcctggtgacctcggccgtcca
aatctcagccgattaaaacttgccattaaatatgaagtaaaaaaatttgtagcccatccc
aactgccagcaacaactcctctccatctggtatgagaacctctctgggttacggcagcag
accatggcagtcaagtttctcgtggtcctcgcggttgccattggactgcccttcctggct
ctcatatactggtgcgctccatgcagcaagatggggaagataatgcgtggaccattcatg
aagtttgtagcacacgcagcttccttcaccattttcctggggctgcttgtcatgaatgca
gctgacagatttgaaggcaccaagctcctccctaatgaaaccagcacagataatgcaaga
cagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgg
gtaataggcatgatatgggctgaatgtaaagagatctggactcaaggccctaaagagtac
ttatttgagttatggaatatgctcgattttgggatgcttgcaatctttgcagcatcattc
attgcaagatttatggcattctggcatgcatccaaagctcagagcatcattgatgcaaat
gacactttgaaggacttgacaacagttccactgggagacaatgtcaagtactacaatctg
gccaggataaagtgggacccgtctgatccccaaatcatctctgaaggtctctatgcaatt
gctgtggttttaagtttctccagaatagcttacattttaccagcaaatgaaagctttgga
cccctgcagatttcacttggaagaacagtaaaagatatcttcaaattcatggtcatattc
atcatggtgtttgtagcctttatgattggaatgttcaacctctactcctactacattggt
gcaaaacagaatgaagccttcacaacagttgaggaaagttttaagactttgttctgggct
atatttgggctttctgaagtaaagtcggtggtcatcaactacaatcacaagttcattgaa
aacattggctatgttctgtatggtgtctataatgtcacgatggttattgttttgctaaat
atgttaattgcgatgatcaacagctcattccaagaaattgaggatgatgctgacgtggag
tggaagtttgcaagggccaaactgtggttttcctactttgaggagggaagaacacttcct
gtccccttcaatcttgtgccaagtccaaagtccttgctctatctcctcttgaaatttaag
aaatggatgtctgaactggtccagagtcataagaaaggcttccaagaagatgcagagatg
aacaagagaaatgaagaaaagaaatttggaattttgggaagtcatgaagacctttcaaaa
ttttcacttgacaaaaatcagctgtcacacaaacagtcaagtataaggagctcagaagac
ttccatttaaatagcttcagtagtcctccaagacaatatcagaaaatcatgaaaagactc
attaaaagatatgtattgcaggcccaaattgataaggagagcgatgaggtgaatgaaggg
gagctgaaggaaatcaagcaggacatctcaagtcttcgttatgaactccttgaagaaaaa
tctcagaacacagaagacttagcagaacttgttcggaaacttggggagagattgtcctta
cagtcaaaagcggaggaaagccacagatag
DBGET
integrated database retrieval system
