Alexandromys fortis (reed vole): 126514982
Help
Entry
126514982 CDS
T08493
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126514982
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
126514982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
126514982
NCBI-ProteinID:
XP_050020233
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YSNDTWYSNDTWSSQESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKYKKHQEELEKAKAAQALE
GGEADGDPVHNKDCNGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCAH
KVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVG
NLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
ASDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVV
LNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKILSPKD
IMLTLGEPGGAGETGESAPEDEKKEPPPEDENKELKDNHILNHVGLSDGPRSSIELDHLN
FINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPPQPLYDGNSSVCSTADYKPP
EEDREEQAEENPEGELPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKSECESLM
HTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPDYEVNIYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFI
IIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQ
FIDYNRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHSQDGNGVGAPEKEGLLANTMNKMYGPESENSGVQGQGEEEKGSTGDAGPTMELTPTS
SSDTTQTPPPSAPPPSAPPPQSAPQGQTVRPGVKESLV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccacccttgtacccccgggtccccactgcctgcgtcccttc
acccccgagtccctggcagccatagagcagcgggcagtggaggaagaggcccggctacag
cggaataagcaaatggaaattgaggagcccgagcggaagccacgcagtgacctggaagcc
ggcaagaacctaccgctcatctacggggaccccccacctgaagtcatcggcatccccctg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggcaag
gccatcttccgcttctccgccacgcctgccctctacatgctgagccccttcagcatcgtc
aggcgtgtggccatcaaggtgctcattcacgcgctgttcagcatgtttatcatgattacc
atcctgaccaactgtgtgttcatgaccatgagcaacccgccatcttggtccaaggacgtg
gagtacaccttcactgggatctacactttcgaatctcttattaagatgttggcccgaggc
ttctgcattgacgacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcacgatggcgtatgtgacagagtttgtggacttgggcaacatctcagccctgaggact
ttccgtgtgctgcgggccctgaaaaccatcacggttatcccagggctgaagaccattgta
ggagccctgatccagtccgtgaaaaagctgtccgacgtcatgatcctcaccgtcttctgc
ctgagtgtctttgcgctcgtggggctgcagctcttcatggggaacctgcgtcagaagtgc
gtgcgctggcccccgcccatgaatgacaccaacaccacgtggtacggcaatgacacgtgg
tacagcaatgacacatggtacagcaacgacacgtggagcagccaggagagctgggccagc
aactacacctttgactgggatgcttacatcaacgacgaaggaaacttctacttcctggag
ggctccaatgatgccctgctctgtgggaacagcagtgatgccgggcactgccccgaaggt
tatgaatgcataaaggctggacggaaccctaactatggctacaccagctatgacaccttc
agctgggccttcctagctctcttccgcctcatgacgcaggactactgggagaaccttttc
cagctgacccttcgagcagctggcaagacctacatgatcttcttcgtggtcatcatcttc
ctgggctccttctacctcatcaatctgatcctggcggtggtggccatggcctatgcagag
cagaatgaagctaccttggctgaggaccaggagaaagaggaggagtttcaacagatgctt
gagaaatacaaaaaacatcaggaggagttagaaaaggctaaggctgcccaggctctggaa
ggtggggaggcagatggggacccagtccacaacaaagattgcaatggcagcctggacacg
tccggggagaaggggcccccaaggccgagctgcagcgcagacagtgccatctcagatgct
atggaggagctggaagaagcccaccagaagtgcccgccgtggtggtacaagtgtgcgcac
aaagtgctcatttggaactgctgcgccccatgggtgaagttcaagcatatcatccacctg
attgtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctc
ttcatggccatggagcattaccccatgactgagcactttgacaatgtgctctccgtgggc
aacttggtcttcacgggcatcttcactgcagagatggtgctgaagctgattgccatggac
ccctatgagtatttccaacagggctggaacatcttcgacagcttcattgtcaccctcagc
ctggtggagctgggcctggccaacgtgcaggggctgtcggtgctgcgttccttccgtctg
ctgcgtgtcttcaagctggctaagtcatggccaacactcaacatgctcatcaaaatcatt
ggcaactcagtgggtgcgctgggcaacctgacactggtgctggctatcatcgtctttatc
ttcgccgtggtgggcatgcagctgtttggcaagagctacaaggaatgtgtgtgtaagata
gcctcagactgcaccctcccgcgctggcacatgaacgacttcttccactccttcctcatc
gtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatggaggtggcc
ggccaggccatgtgcctcacggtcttcctcatggtcatggtcattggcaacctggtggtt
ctgaatctgttcctggctctcctgctgagctccttcagcgccgacagcctggcagcgtcc
gacgaagacggtgagatgaacaacctgcagattgccatcggacgcattaagtggggcatc
ggctttgccaaagccttcctcctggggctgctgcacggcaagatcctgagccccaaggac
ataatgctcaccctcggtgagcccgggggtgctggggagacgggggagagcgctcctgag
gatgagaagaaggaaccacccccagaagatgagaacaaggaactgaaggacaatcatatc
ctgaaccacgtgggcctgagcgatggcccccgctccagcatcgagctggaccacctcaac
tttatcaacaacccctacctcaccatccaggtgcccattgcttccgaggagtccgacctg
gagatgcccaccgaggaggagactgacacgttctcggagcctgaagacattaagaagcca
ccacagccactctacgatgggaactcctccgtctgcagcacggctgactacaagccccct
gaagaggaccgtgaggaacaggctgaggagaaccctgaaggggagctgcctgaggaatgc
ttcaccgaagcctgcgtgcaacgctgcccctgcctctatgtggacatctcccagggccgt
gggaaaatgtggtggacgctgcgccgggcctgcttcaagattgtcgagcacaactggttc
gagaccttcattgtcttcatgatcttgctcagcagtggagccctggccttcgaagacata
tacattgagcagcggcgagtgatccggactatcctggaatatgctgacaaggtcttcacc
tacatcttcatcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtatttc
accaacgcctggtgttggctcgatttcctcatcgtggatgtctccatcatcagcctggtg
gccaactggctgggctactctgagctggggcccatcaaatccctgcgcacactgcgggcc
ttgcgtcccctgagggcgctctctcgatttgagggcatgagggtggtggtgaacgccctc
ctgggagccatcccctccatcatgaacgtcctcctcgtctgcctcatcttctggcttatc
ttcagcatcatgggggtcaacttgttcgctggcaagttctactactgcgtcaacaccacc
acctctgagaggttcgatatctctgtggtcaacaataagtccgagtgtgaaagcctcatg
cacacgggccaggtccgatggatgaacgttaaggtcaactatgacaacgtgggcctgggc
tatctgtccctccttcaggtggccactttcaagggttggatggatatcatgtatgcggct
gtggactcccgggagaaggaggagcagccagactatgaggtgaacatctacatgtacctt
tacttcgtcatcttcatcatctttggctccttcttcacgctcaacctcttcatcggggtc
atcattgacaacttcaaccaacagaagaagaagtttggagggaaagacatcttcatgaca
gaggagcagaagaagtactacaacgccatgaagaagctgggctccaagaagccccagaag
cccatcccccgccctcagaacaagatccagggcatggtgtatgacttcgtgacaaagcag
gtgtttgacatctccatcatgatcctcatctgcctcaacatggttaccatgatggtggag
acggacgaccagagccagctcaaggtggacatcctgtacaacatcaacatggtcttcatc
atcatcttcacaggggagtgtgtgctcaagatgttcgccctgcgccactactacttcacc
attggctggaacatcttcgacttcgtggttgtcatcttgtccatcgtgggcctcgcgctt
tctgacttgatacagaaatatttcgtgtcgcccacgttgttccgtgtgatccgcttggca
cggatcgggcgtgtcttgcgtctgatccgtggggccaagggcatccggacgctgttgttt
gccctcatgatgtcacttcctgccctcttcaacatcggcctccttctctttctggttatg
ttcatctactccatcttcggcatgtccaacttcgcctatgtcaagaaagaatcgggcatc
gacgacatgtttaactttgagacctttggcaacagtatcatctgtctcttcgagatcacc
acgtcagctggctgggatgggctactgaaccccatcctcaacagtgggcctccagattgt
gacccgacgctggagaacccaggcaccaacatcaagggtgactgtggcaacccatccatc
ggcatctgcttcttctgcagctacatcattatctccttcctcatcgtggtcaacatgtac
attgccatcatcctagagaatttcaacgtggccactgaggagagcagcgagcccctcagt
gaggacgactttgagatgttctatgagacctgggaaaagttcgaccctgacgccactcag
ttcatcgactacaaccgcctctccgactttgtggacaccctgcaggagccgctgagaatc
gccaagcccaacaagatcaagctgatcacgttagacttgcccatggtgccgggggacaag
atccactgcctggacatcctctttgccctgaccaaagaggtactgggtgactctggggag
atggatgccctcaaacagaccatggaggaaaagttcatggcagccaacccctccaaggtc
tcctacgagcccatcaccaccaccctcaagaggaagcaggaggaggtgtgtgccatcaaa
atccagagggcctaccgccgccacttgctgcagcgctctgtgaagcaggcctcctacatg
taccgccacagccaggatggcaatggagtcggggcccccgagaaggagggattgcttgcc
aacaccatgaacaagatgtacggccctgagagtgagaacagtggtgtgcagggtcaggga
gaggaggagaaaggttctacaggggatgctggacccaccatggagctcacacccaccagc
tcctcggacaccactcagactcctcctccatcagcaccaccaccatcagcaccaccaccg
caatcagcaccacaggggcagactgtgcggccaggggtcaaagagtctctcgtctag
DBGET
integrated database retrieval system
