Alexandromys fortis (reed vole): 126515128
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Entry
126515128 CDS
T08493
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot02010
ABC transporters
mfot04146
Peroxisome
mfot04977
Vitamin digestion and absorption
mfot04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126515128
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126515128
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
126515128
04980 Cobalamin transport and metabolism
126515128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126515128
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfot02000
]
126515128
Enzymes [BR:
mfot01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
126515128
Membrane trafficking [BR:
mfot04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
126515128
Transporters [BR:
mfot02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
126515128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_22
AAA_30
DLIC
DEAD
AAA_29
nSTAND3
AAA_19
T2SSE
AAA_23
IRK
Motif
Other DBs
NCBI-GeneID:
126515128
NCBI-ProteinID:
XP_050020450
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MMAVPGPAARAGARPRIDLQLVQRFLRIQKVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQ
VGLIPSQYYGVLGNKDLDGFKALTFLAVVLIVLNSALKSFDQFTCNLLYVNWRKDLTEHL
HNLYFRARVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSMTSRLIVSPFTLAYYTYQCF
QSTGWLGPVCIFGYFIMGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFY
RAGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGSILSYVVIAIPIFSGIYG
DLSPTELSTLVSKNAFVCIYLINCFTQLIDLSTTFSDVAGYTHRIGELQEALLDTSRKSQ
DCESLGESEWDLSKAPGWPVTEPSDTAFLLDRVSILSPSSDKPLIKDLSLKICEGQSLLI
TGNTGTGKTSLLRVLGGLWESMKGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLK
EIYPDSGSADDERIMRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFY
LQPKYAVLDEATSALTEEVESELYRLGQQLGMTFISVGHRPSLEKFHSWVLKLYGGGRWE
LTRIKME
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggtcccagggcccgcagcccgagctggcgccaggcccaggatagatctgcaa
cttgtccagcggttcctgaggatacagaaggttttctttccttcttggtcatcacagaat
gtcttaatgttcatgacgctcttgtgtgtgaccctcctggagcaattggtgatctaccaa
gttggcttgatccccagtcagtattatggggtcctaggaaacaaagacctggatggattt
aaagccctgaccttcctggctgtggtgctcattgttctcaactcagccctgaagagcttt
gaccagttcacctgcaacctgctgtatgtgaactggaggaaggacctcaccgagcacctg
cacaacctgtacttccgggcccgagtgtactacaccctcaacgtgctgcgggatgacatc
gataatccggaccagcgcatcagccaggacgtggagcggttctgcaggcagcttagcagt
atgaccagccggctgatcgtatcccccttcaccctggcctactacacgtaccagtgcttc
caaagcacaggctggcttgggcctgtgtgcatttttggatatttcatcatgggaaccatg
gtgaacaagactttgatggggcccattgtgacgaagctggtgcagcaggagaagctggag
ggggattttaggttcaagcacatgcagattcgagtgaatgccgagcccgccgctttctac
agagctgggctcgtagaacacatgagaacggaccgcaggctgcagagactccttcaaacc
cagagagagctgatgtccagggagctctggctgtatattggtatcaacacctttgattat
ctgggcagtattttgagctacgttgtcattgcgatccccattttcagtgggatctatggc
gacctgagccccacggagctcagcaccctggtcagcaagaatgcctttgtgtgtatctac
ctcatcaactgcttcacccagctcattgacctgtccaccacgttctcagacgtcgctggt
tacacgcacaggattggagagcttcaggaggccctgctggacacgtcccgaaaatcccaa
gactgtgagagcctgggcgagagtgagtgggatttgagcaaggccccagggtggccagtc
acagagccatcagacacagcttttctgcttgaccgggtttccatcctttccccgtcctct
gacaagcccctgatcaaggacctgagcttgaagatctgtgaggggcagagtctgctcatc
acaggcaacacgggcaccggcaagacctccctgctgcgggtgctgggcggcctgtgggag
agcatgaagggctcagtgcagatgctgactgactttgggccccacggggtgctgttcctg
ccacagaagccattcttcactgatgggacacttcgggagcaggtgatctatcccctgaag
gagatctaccctgactcaggttctgctgatgatgaaaggatcatgaggttcttggagttg
gcaggcttgtccagcttggtggcaaggactggaggtctggaccagcaggtggattggaac
tggtatgatgtcctgtcaccaggggagatgcaaagactgtccttcgctcgcctcttctac
ctgcagccaaagtatgcagtgcttgatgaagccaccagtgccctgacggaggaggtggag
agtgagctctatcgccttggccagcaactggggatgacatttatcagcgtgggacatcgg
cccagccttgagaagtttcactcctgggttctgaaactctatggaggaggacggtgggaa
ctgaccaggatcaaaatggagtga
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