Alexandromys fortis (reed vole): 126516105
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Entry
126516105 CDS
T08493
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126516105
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126516105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126516105
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126516105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_6th
Ig_NUP210_9th
Ig_NUP210_14th
Ig_NUP210_16th
Ig_NUP210_2nd
Ig_NUP210_4th
Ig_NUP210_8th
Ig_NUP210_1st
NUP210_Ig
Big_2
Motif
Other DBs
NCBI-GeneID:
126516105
NCBI-ProteinID:
XP_050022267
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MIVSRAPATQSFRHLFCLTPHHLFLFLVGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYSWHSTHHDVVTIEPSYENGTSCSQRAVLVAESTQPIRLSSIILAREVGQKRTPYLITD
GCESPCGCRELNSGPMEEQAMLLTTGPSLQPLTALRRSCSHWNTFSTLAGMVFEWSIAQD
NESAREELFSKIRILKFSEAEYSPPDYIVEMEKEERQGEVVLVSGMRTGAAVVKVRIYEP
FYKKVSAALIRLLVLENIFLIPSHDTYLLVGAYIKYQVAKMVQGRMTEVKFPLEHYTLEL
QDHRCTNNRSTSGKVALLDEKTATVTALQLGQTNLVFVHKSVHMCSVSGLPNATICVVEP
GYLGFTVHPGGRWSLEVGQVYVVTVDVFDKSSTKVHISDNLKITFQFLKEYFEEQLSTSN
GSYHVLKALKDGVAMINATLTSSIQEVGVSTASQSLGALAGRLFLKIYVMKLNKMELLPF
QADVEIGQIIEVPIAMYHVNTETKETIAFTDCSHLPLDLNSDKQGVFTLYKEGIKSPGPE
HCSSVHIAAMSPGHTVVTVSVTGHEEQVGSSATFAAYEPLKAVNPVEVALVTWQSVKEMV
FEGGPQPWILEPSRFFLELSMEKPEGIRVTEARLPARRKQNQYVYRVLCLELGEQALTVR
IGNHPGVLNPSPSVETVQVRFICAHPASMLVTPVYKVATGTQPCPLPQYNKQLIPVSSLR
DSVLELAVFDQHGRKFDNFSSLILEWKSSNETLAHFEDSKSMEMVAKDDGSGQTHLHGHL
HQVHSLEVSVIYGVNYLGYSKSGPEISNSPRSAVAELLLVEDVTVRPENATIYNHPDVKE
VFHLVEGSGYFLVNSSEQDIVTIVYAEAESSIQVVPVHPGFLTLEVYDLCLAFLGPATAW
LRVSDIQEVELDLIDKVEIGKTVLVVVRVLGSSKHPFRNKYFRNMDVRLQLASAIVTLRL
MEDQDEYSENYVLRAITVGQTTLVATATDRMGRKFTSTPRHIEVFPPFRLVPEKMTLVTT
NMMQIMSEGGPQPQSIIHFSISNQTVAAVTRRGQVTGKVVGTAVVHGTIQTVNEDTGKVI
VFSQDEVLIEVVQLRAVRILAAATRLVTATEMPVYVMGVTSTQTPFSFSNASPMLTFHWS
MSKRDVLDLIPRHSEVSLQLPAENNFAMVVHTKAAGRTTIKVTVRSESDSFGQFEGSVLE
LSDEIQILVFEKLQLFYADCQPEQILMPMNSQLRLHTNREGAAFVSSRVLKCFPNSSVIE
EEGQGLLRSGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRMSSYPKLYTGQGRTL
SAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNRNYTYMAQAVNRGV
TVVGLWDQRHPGMADYIPVAVEHAIEPDTNLTFVGDVICFSTHLVNQHGEPGLWMISPNN
IVQTDTATGVGVARSPGTATIFHDIPGVVKTFREVVVNASSRLTFNYDLKTYLTNTPNAT
VFKLFISTGRNDVNLKGSCTPSQASAVAKVLLPETLMLCHVQFSNTLLDIPASKVFHIHS
EFSMERGVYVCLIKVRQNSDELRQALSVADTSVYGWATLVSERSKNGMQRILIPFIPGFY
MNQSELVISHKDIGELRVLGVERVLESLEVFSSSPFLAVSGHRHSTLMTGLVIYLVRAVN
FTAFQLSSPVFINVSCALTSQHEAVVVRAKDLSGSDHCEDSGVFKNVAGSYQILLFTLFA
VLASTAFIFLAYNAFLNKIQTIPVVYVPTIGTAQPGSYTTTCSPPHFLRPQPPLVQSRLQ
HWLWSIKH
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgattgtctctagggctcctgcaacccaaagcttcaggcaccttttctgcttgacccca
caccacctcttcctgtttttagttgggaccttggccaacaaactcaatgtgccgcaagtg
ttactgccgttcagccgggagccaggccgggtgcccttcttgctggaggcgcagcgcggc
tgctacagctggcattccactcaccacgatgtagtaaccattgagccttcttatgaaaac
ggcacctcttgttcccaaagagctgttcttgttgctgaatccacccaaccaatccgcctc
agcagcattattcttgctcgagaagtaggccagaagaggacaccatacctcattacagat
ggttgtgagtcaccatgtggttgccgggaattgaactcaggacctatggaagagcaggca
atgctcctaaccactgggccatctctccagcccctaacggcgctcaggcggtcatgctcc
cactggaacacgttcagcactctggcaggcatggtgtttgagtggagcattgcccaggat
aacgagtcagccagagaagagctgtttagcaaaattaggatcctgaaattctcagaagca
gaatattctccccctgactatatagttgagatggaaaaagaggagcgacaaggagaagtg
gttttggtgtctgggatgagaactggagctgctgttgtgaaagtccgaatttatgagcca
ttctacaagaaagtctcagcagccttgatccgtctgcttgttctggagaacatatttctt
ataccatctcacgatacgtatctcttagtaggagcctatattaaataccaggttgcaaaa
atggttcagggaagaatgacagaggtgaaatttcccctggaacattacacattggaattg
caagaccacagatgcacgaataaccgctctacttctgggaaagtggctctgctggatgag
aaaacagccacggtcaccgctctccagctgggccaaactaacctggtctttgtccacaaa
agtgtccatatgtgctctgtatctggactgccaaacgctaccatatgtgtcgtagagcct
ggatatttaggtttcacggttcatcctggcggccgatggagtctcgaggtgggccaggtg
tatgtcgtcacagttgacgtgtttgataaaagcagcacaaaggttcatatttcagacaat
ctcaagatcacgttccagtttctgaaggaatattttgaagagcaactaagtacttccaat
ggatcttaccatgtgttgaaagccctgaaagatggggttgcgatgataaatgcgaccctg
acttccagcattcaggaggtaggtgtctcaacagccagccaatccctaggagccctggca
gggcggcttttcctcaagatatatgtcatgaagctgaacaaaatggaactgttaccattt
caagctgatgtagaaattggtcagattattgaggtccccattgcaatgtatcatgtcaat
acagaaaccaaagagaccatcgcattcaccgactgctctcacctacccctggatctcaac
tcggataagcaaggagtcttcactctttataaagaaggtattaaaagccctggaccggag
cactgttctagtgtgcacatagcagccatgtctccaggccacactgtggtgacagtcagc
gtgactgggcatgaagagcaggttgggagcagcgccacatttgccgcgtatgagcctcta
aaggctgtgaaccctgtggaagtggccttggtgacgtggcagtctgtgaaggagatggta
tttgaagggggccctcaaccatggatcttggagccttcccgattttttttggaactgagc
atggagaagccagagggcattagagtaacagaggcccggctgccagctaggaggaagcag
aaccagtatgtctaccgagtcctgtgcctggagctaggagaacaagccctcactgtacgg
attgggaatcacccgggtgtcctgaaccctagtccctctgtggaaacagtgcaggtgcgc
ttcatctgtgcccaccctgccagcatgctggtgacaccagtgtacaaggtggcaactggc
actcagccgtgtcctctgccacagtacaacaagcaactgattcctgtgtccagcctgagg
gactcggtcctggaactggcagtatttgatcaacatgggaggaagtttgataatttcagt
tcattaatacttgaatggaaatcttccaatgagacgctagcccattttgaagattctaag
tcgatggagatggtagccaaagatgatggcagtggacagacccatttgcatggtcacctc
caccaagtacactctttggaggtcagtgtgatctacggagtgaattacctaggttatagc
aagtcagggccagaaatctccaactcgcccagatctgcagtggcagagctgctcctggtg
gaggatgtcactgtgaggcccgagaacgctaccatctacaaccatcctgacgtgaaggaa
gtatttcacctggtggaagggtctggctacttcctagtcaacagcagtgagcaagatata
gtcaccatcgtttacgcggaagcagaaagctctatccaggtggttccagtccatcctgga
tttctaaccttggaggtgtacgacctgtgcttggctttcttgggtccagcaactgcctgg
ctcagggtgtcagacatacaggaggtggagctggatctgatcgacaaggttgagatcggc
aaaaccgtgttagtggttgtgagggttcttggctcttccaaacacccttttcggaacaag
tacttcagaaacatggatgtcagacttcaactggcgtctgccattgtcaccctgaggtta
atggaggatcaggatgagtactctgaaaactacgtgctccgggccatcaccgttgggcaa
accacacttgtggccactgccacagacaggatgggaagaaagttcacatccacaccgcgg
cacatcgaggtatttcctccattcagacttgttccggagaaaatgacgctggttacaact
aacatgatgcagataatgtctgaaggcggccctcagccgcagtccatcatccacttctcc
atcagcaaccagacggtagctgctgttaccaggcggggacaagtcacagggaaagtggtt
ggcacagccgtcgtgcacggcaccatccagacagtgaatgaagacactggcaaagtcatc
gtgttttcccaggatgaagtcctgattgaagttgtccagctacgggctgtgaggatcctg
gcagccgcaacccgactcgtcacagctactgagatgccagtttacgtcatgggagtgact
agtacccagactcctttctccttcagcaatgccagccccatgctcactttccactggtcc
atgagtaagcgagatgtgctggatctgatacccaggcattcagaggtgtctctgcagctt
ccagcagagaacaactttgccatggttgttcacacaaaagcagctggtagaacgacaatc
aaggtcacggtccgaagcgagagcgactcctttgggcagtttgaggggagtgtgctggaa
ctgtctgacgagatccaaattctggtgtttgagaaactccaactcttctatgcagactgc
caacctgagcagattctgatgcctatgaattctcaactcaggctccacaccaacagagaa
ggcgccgcctttgtgagttcccgtgttctcaagtgcttcccgaactcctcagtcattgaa
gaagagggccaagggctcctgagatctgggtccatcgcaggcacagcagtgttagaagtc
acttctatagaaccttttggagtcaatcaaacaaccataactggagtccaggtggcacca
gtgacataccttcgaatgagcagctaccccaagctatacacaggccaaggaaggacccta
tcagcctttcccttgggcatgtctctcacctttatcgttgagttttataataacattgga
gagaaattccacacccacaatactcgactttatatggctctgaacagagatgacttgctg
ctcattggaccaggaaacagaaactatacatacatggcccaggctgtgaacagaggggtg
acggttgtggggctctgggaccagcggcatcctggcatggcggactatattcctgttgct
gtagaacacgccattgagccagacaccaaccttacctttgttggtgatgtcatctgcttc
agcactcacctggtcaatcagcatggtgagcctgggctgtggatgatttctcccaacaat
attgtacagacagacacagccactggagtgggagtggctaggagcccaggaactgcaacc
atctttcatgacatccctggagttgtgaagacatttcgagaggtggtagtcaatgcttcg
tcaagattaacattcaactatgacctcaagacttacctcacaaatacccccaatgcaact
gtgttcaaactcttcatcagcaccggcagaaatgacgtcaaccttaaagggtcctgtacc
ccaagtcaggcttccgctgttgcaaaagttcttcttcctgagacactcatgctatgccac
gtgcagttcagtaatactttactagacatcccagcaagtaaagtcttccacatccattct
gagttcagcatggagagaggggtctatgtctgcctaatcaaggttcgacagaattccgat
gagctgcgccaagccctaagtgtggccgacacctcggtatatgggtgggcaactctggtc
agtgaacgaagcaagaatggaatgcaaagaatcctcatccctttcatccctggtttttac
atgaaccagtcagagttggttattagccacaaagacattggcgagctcagagtcctggga
gtggaaagagttctcgagagtctagaggtcttttccagctccccatttctagcagtctct
ggccacaggcactctaccctcatgacaggcctggttatctacctagtaagagcagtcaac
ttcacagccttccagctgtcctcaccggttttcattaatgtttcctgcgcactcaccagt
cagcatgaggctgtggtggtcagagccaaagacctatctggttcagatcactgtgaagat
tcaggtgtcttcaagaatgttgctggttcttaccagatcctcctatttaccctctttgct
gtgctggcatcaactgctttcatcttcctagcatacaatgccttcctgaacaagatacag
actattccagttgtttatgtaccaactataggaacagctcagccaggttcttacacaacc
acatgttctccccctcacttcctgaggccacagccacctctggtacagagtcggctacaa
cactggttatggagtataaagcactaa
DBGET
integrated database retrieval system
