Magnetovirga frankeli: D5125_02450
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Entry
D5125_02450 CDS
T11075
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
mfra Magnetovirga frankeli
Pathway
mfra01501
beta-Lactam resistance
mfra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D5125_02450
01503 Cationic antimicrobial peptide (CAMP) resistance
D5125_02450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfra02000
]
D5125_02450
01504 Antimicrobial resistance genes [BR:
mfra01504
]
D5125_02450
Transporters [BR:
mfra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D5125_02450
Antimicrobial resistance genes [BR:
mfra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D5125_02450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QFY88432
LinkDB
All DBs
Position
complement(3105282..3109364)
Genome browser
AA seq
1360 aa
AA seq
DB search
MKPEESKQSAPGTEQEDLGLAGKTARFFISSPLAPLLFISMMLMGILGLIMTPRQEDPQI
SVPMVDIFVHYQGASAAQVSTLAIQPLERLMSEIPGVKHVYSASMRGQGAVTIQFEVGED
MGPSLVKVNDKLDSNRDLMPPGVSPPMVKAKGIDDVPVVNLTLWSKDINQDGRPDVDDGQ
LRMLAHNVMQNLKEIPDTGNSFVVGGRSEQVRIEVSPDKLSGYGISLDQVAGAIQGANSE
VVAGGVETRGSYISVTTGSFLETIEDINRLVVGNHNNIPIYVRDVARVVQGPEDTSQMVQ
YYTGPASELNITANGMPAVTIAIAKKVGSNGVTVANSLIERAEELKGSLIPSNVEVSVTR
NYGQTANDKVNELIFKLFVATSFVFFLVLAAFRAFKPAIVVVLVIPVVLLMTVFAAWIMG
FTIDRVSLFALIFSIGILVDDAIVVVENIYRRWLEEGDTDEDTAVDAVREVGNPTILATF
TVIAALMPMGFVSGMMGPYMMPIPALGSVAMLISLFAAFVFTPWLAISPMLRPTMKYLQV
AEQREHKEAEWLEGLYRRLLVPLIESKSKRRLFRLIMWGSFLFACSFFYTKWVTVKMLPL
DNKPEFAVVVDMHEGTALPITANIAQHIAEAMRTLPEVTAVQTYVGTARPFDFNGMVRHY
YLRDKPWQGEVQVQLLDKTERKRSSHEIAVAARAMVKEILSPELGRFAVVEMPPGPPVLQ
SVVAEIHGPSAEVRRRFAQDMTRMFEQAESLRDVDNFIQQPLSYWRFEVDKEKAVRRGIS
VESINRNLSMALGGMPLGDVKQRAGHEPIEILIQVPLAERSEITRLGDLPIQSGQGMTMP
LRELGRFEEMQEDDVIYHKDLRPVEFVVGDVGGVLAAPVYGMLQIGELLKDYTAPDGVNP
QGHWLGPPPDNNVSAFEWTGEWTVTYETFRDMGAAFMVALVLIYILVVWEFGNFRIPALI
MAPIPLTLLGIIPMHWVMDAEFTATSMIGWIALAGIIVRNSILLVDFSVHEIQHGTHVKE
AVIKACKTRTRPIMITAFALVCGSSVIFTDPIFQGMAISLASGVMVSTILTLVVIPLGCI
AASESLCSVAGVDCSERVPAAGSTPPSHNPASGTQAAAKPSLLFSLWGKLVGLLTLIFFA
LRGLLLLLAQLFKGSGQPKPPSPQGPGSPAPETAGKGEAAQAPVAASAAASASEQAAQSW
AAEAASPAEPPSEPVLEAEARGAVIAPLSATEPEPAAAPAPAPAAEPQPRPDPEPEAVPE
PEPQSKPAPKPKPAPEPAPEPAPKATEPSEVEGAASAAPKSAPKAPRKRSAARKKIRAKT
LQKKTDEDTTNRPDSSAPAKPAAKKSARRGIRLKNIDDSE
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagaagaatcaaaacaatcagcgccagggacagagcaagaagacctcggtctg
gcgggcaagaccgcccgcttcttcatcagttcgcccctggcaccactgctgttcatctcc
atgatgctgatgggcatactgggcctgatcatgaccccccggcaggaggacccgcagatc
tccgtgcccatggtggacatcttcgttcactaccagggtgcctcggcggcgcaggtctcc
accctggcgatccagccactggagcgcctgatgagcgagatccctggggtcaagcacgtc
tattccgcctccatgcgcgggcagggggcggtaaccatacagtttgaggtgggcgaggac
atgggcccctcgctggtcaaggtgaatgacaagctcgactccaaccgcgatctgatgcca
cctggggtatccccgcccatggtcaaggccaagggcatagacgacgtgcccgtggtcaac
ctgaccctctggtcgaaggacatcaaccaggatggacggcccgacgtggatgacggccag
ctgcgcatgttggcgcacaacgtgatgcagaacctcaaggagataccggacacaggcaac
agctttgtcgtcggtggccgcagcgaacaggtgcgcattgaggtatcaccggacaagctc
tccggctacggcatcagcctggatcaggtggccggtgccattcagggtgccaacagcgag
gtggtggccggtggcgtggagacccgtggcagctacatcagcgtcaccaccggctccttc
ctggagaccatcgaagacatcaaccgcctggtggtgggcaaccacaacaacatccccatc
tatgtgcgcgacgtggcgcgggtggtgcaggggccggaagatacctcgcagatggtgcag
tactataccggcccggcctcggagctgaatattacagccaacggcatgccggcggtgacc
atcgccatcgccaagaaggtgggcagcaacggcgtcaccgtggccaatagcctgatcgag
cgggccgaggaactcaagggcagcctgatcccctccaacgtcgaggtcagcgtcacccgc
aactacggccagaccgccaacgacaaggtcaatgaactgatcttcaagctgttcgtggcc
accagcttcgtcttcttcctggtgctggctgccttccgcgccttcaaaccggccatagtg
gtggtgctggtgatcccggtggtgctgctgatgacggtattcgccgcctggatcatgggc
ttcaccatcgaccgggtcagcctgttcgccctgatcttctccatcggcatcctggtggat
gacgccatcgtggtggtggagaacatctaccggcgctggctggaggagggcgataccgac
gaggatacggcggtggacgccgtgcgcgaggtgggcaaccccaccatactggctaccttc
accgtcatcgctgcgctcatgcccatgggctttgtcagcggcatgatggggccgtacatg
atgccgatcccggcgctgggctcggtggccatgctcatctccctgttcgccgccttcgtg
tttaccccctggcttgccatctcgcccatgctgcggcccaccatgaagtacctgcaggtg
gccgagcagcgcgagcacaaggaggcggagtggctggagggcctgtaccgcaggctgctg
gtacccctgatcgagagcaagtccaagcgacgcctgttccgtctgatcatgtggggcagc
ttcctgtttgcctgttccttcttctacaccaagtgggtgacggtgaagatgttgccgctg
gacaacaagcccgagttcgccgtcgtggtggacatgcacgagggcacggccctgccgatc
accgccaatatcgcccagcacatcgccgaggccatgcgcaccctgcccgaggtgacggcg
gtgcagacctatgtgggcaccgcccgccccttcgacttcaacggcatggtgcgtcactat
tatctgcgcgacaagccctggcagggcgaggtgcaggtacagcttttggacaagaccgaa
cgcaagcgcagcagtcacgagatcgccgttgcggcgcgggccatggtgaaggagatactc
tcccccgaactgggccgatttgccgtggtggagatgccaccggggccgccggtgctgcaa
tccgtggtggccgagatccatggtccctcggcggaggtgcggcggcgcttcgcccaggac
atgacgcgcatgtttgaacaggccgagagcctgcgcgatgtggacaacttcatccagcag
ccgctcagctattggcgcttcgaggtggacaaggaaaaggcggtgcggcgcggcatctcg
gtggagtccatcaaccgcaatctgtccatggccctgggcggcatgcccctgggtgatgtc
aagcagcgcgccgggcatgagcccatcgagatcctcatccaggtgcccctggcggagcgc
tccgagatcacccgtctgggcgatctgccgatccagtccggccagggcatgaccatgccc
ctgcgcgaactgggccggtttgaagagatgcaggaggacgatgtcatctaccacaaggac
ctgcgaccggtggagttcgtcgttggcgacgttggcggcgtgctggccgcgccggtgtac
ggcatgttgcagatcggcgaactgctcaaggactacaccgccccggacggcgtcaacccc
cagggccattggctgggaccgccgccggacaacaatgtctccgcctttgaatggaccggc
gagtggacggtgacctacgagaccttccgcgacatgggggccgccttcatggtggccttg
gtgctgatctacatcctggtggtctgggagtttggcaatttccgcatcccggccctgatc
atggcccccatccccctcaccctgctgggcataatccccatgcactgggtgatggacgcc
gagttcaccgccacctccatgatcggctggatcgccctggccggcatcatagtgcgcaac
tccatcctgctggtggacttctcggtacatgagatccagcacggcacccacgtcaaggag
gcggtgatcaaggcctgcaagacccgtacccggcccatcatgatcaccgccttcgccctg
gtctgcggctccagcgtgatcttcaccgaccccatcttccagggcatggccatctccctg
gcctcgggggtcatggtctccaccatactcaccctggtcgtgatcccgctgggctgcatc
gccgccagcgaatccctctgctcggtggccggggtggattgcagcgaacgggtgcccgca
gcgggatcgaccccgccgagccacaacccggcctcgggtacgcaagccgctgccaagccg
tccctgctgttcagcctatggggcaagctggtgggcctgctgacgctgatcttctttgcc
ctgcgtggcctgttgctgttgctggcgcagctgttcaagggctctggccagcccaaaccg
cccagcccacaggggccgggcagcccagcgcccgagacagctggcaagggcgaagcggcg
caggccccggtcgccgcgtcggcggcggcctccgcctcggagcaggcggcacagagctgg
gcggcagaggccgcgtcccctgccgaacccccttccgagccagtgcttgaggcggaggca
aggggcgcagtcatcgcgcccctgtcggccacggagccagaaccggcagcagccccagca
ccagcgcctgcggcagaaccccagccccggcctgatcccgaacccgaggccgtgccggag
ccagagccccaatctaagccagcgcccaagcccaagccagcaccggagccagcaccggag
ccagcacccaaggccactgagccgagcgaggtcgagggtgcggcctcagccgcgcccaag
tcggcccccaaggccccgcgcaagcgctcggcggcgcgcaagaagatccgcgccaagacc
ttgcagaaaaagaccgacgaagacactacaaacaggcccgacagctcggcccccgccaaa
ccggcggccaagaaaagtgcccgcagaggcatacgtctaaaaaacatcgatgattccgaa
tag
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