Magnetovirga frankeli: D5125_08895
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Entry
D5125_08895 CDS
T11075
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
mfra Magnetovirga frankeli
Pathway
mfra01501
beta-Lactam resistance
mfra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D5125_08895
01503 Cationic antimicrobial peptide (CAMP) resistance
D5125_08895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfra02000
]
D5125_08895
01504 Antimicrobial resistance genes [BR:
mfra01504
]
D5125_08895
Transporters [BR:
mfra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D5125_08895
Antimicrobial resistance genes [BR:
mfra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D5125_08895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
RimP_N
Motif
Other DBs
NCBI-ProteinID:
QFY89592
LinkDB
All DBs
Position
801212..804421
Genome browser
AA seq
1069 aa
AA seq
DB search
MASETPLGISGGTAKRFLTTEITPLLALVGLLLGLFAVAVTPREEEPQINVTFANIFIPF
PGASANEIESLVATPAEQVLSEIEGLKHVYSTSMPGMAVITVRYKVGEDRTDAIVRLYNK
IFSNEDWLPRNLGVGQPIIKPMGIDDVPIITATLWSEDQSMGAYELGQVAHAIEAELKRV
PGTRDIYTLGNPERVVHVLLDPQALAGYNIDLNDLRQTLQAANSTRDNLPITRDNTEVMV
QAGALLTTPEEIGDLVIGVSNQRPVFLRDVARIKHYADQPEAFVWMGAGPAGQISAGFHP
AVTIAVAKKPGTNAVEIAEQVIERFEHLRGIFIPDNVEITITRNYGETADQKAQKLITKL
VFATLSVVLLVWLALGWREALIVGGAVVLTLAITLFASWAWGFTLNRVSLFALIFSIGIL
VDDAIVVVENIHRHLALGADNLLEAIPKAVDEVGGPTILATFTVIAALLPMAFVTGLMGP
YMSPIPINASMGMLISLVVAFVVTPWMTYQGLRRVAHRYAGDASHGHGGGSPGLERFFGR
VINPFVLGQAARRNRWLLLGGILLLIALSIGLAGAKLVVLKMLPFDDKSEFQIVVDRDEG
VSLEQTARVVNELGDYLRQVPEVMNYQAYVGTAAPIGFNGLVRQYYLREGAHVADLQVNL
VDKGQRNRKSHEIALSVREPLQAIGRKYNANVKIVEVPPGPPVQSPLVAEIYGLDYTGQI
AMARQVRAQFEQTADIVDVDDSVEHPAAKFLVQVDRQKASLLGVPQAEVARALATVLGGE
DAGFLHGENMKYAVPIRIEYSEADKADLDQVLSLRVRALSGSLVPLSEIVKVIPTTRQHS
IQHKDLLPVVYVTGDMAGQTDSPLYGLFDIVAGLKQELPGLEQSFINAPENPYDYSLKWD
GEWQITYETFRDMGIAYSVGLILIYLLVVAQFRSYLVPLVIMAPIPLTLIGILPGHALAG
AQFTATSMIGMIALAGIIVRNSILLVDFINEQTRAGMAFSRAVVQAAAVRSKPIVLTGLA
AMAGAFFILDDPIFSGLAVALISGILVSTVLTLVVIPVVYYAAMEKRLG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaacccccctgggcatctccggcggcaccgccaagcgctttctcaccacc
gagatcaccccattgctggccctggtggggctgttgctggggctgttcgccgtggcggtg
acgccgcgtgaggaagagccgcagatcaacgtcaccttcgccaatatcttcatccccttc
cccggtgccagcgccaacgagatcgaaagcctggtggccaccccggccgagcaggtgctg
tccgagatcgagggcctcaagcacgtctattccacctccatgcctggcatggcggtgatc
acggtacgctacaaggtaggcgaggaccgcaccgatgccatagtgcggctgtataacaag
atcttctccaatgaggactggctgccgcgcaacctgggcgtgggccaaccgatcatcaag
cccatgggcatagatgatgtgcctatcatcaccgccaccctgtggagtgaggaccagagc
atgggggcctatgagctgggccaggtggcccacgccatcgaggccgaactgaagcgggtg
ccgggcacccgcgacatctacaccctgggcaaccccgagcgggtggtgcatgtgctgctc
gatccccaggccctggccggctacaacatcgacctcaacgacctgcgccagaccctgcag
gcggccaacagtacgcgcgataacctgcccatcacacgggataacaccgaggtcatggtg
caggccggtgccctgttgaccacgccggaggagatcggcgacctggtgatcggcgtatcc
aatcaaagaccggtgttcctgcgcgatgtggcgcggatcaagcactatgccgaccagccc
gaggcctttgtctggatgggggcaggcccggccgggcagatcagcgccggttttcacccg
gcggtgaccatcgccgtggcaaagaagcccggcaccaacgcggtggagatcgccgagcag
gtgatcgagcggtttgaacacctcaggggcatctttatcccggataacgtcgagatcacc
atcacccgcaactacggtgagaccgccgatcagaaggcgcagaagctgatcaccaagctg
gtgttcgccaccctctcggtggtgctgctggtgtggctggcgctgggctggcgcgaggcg
ctgatcgtcggtggtgccgtggtgctgaccctggccatcaccctgtttgcctcctgggcc
tggggctttaccctcaaccgggtatccctgttcgccctgatcttctccatcggcatcttg
gtggacgatgccatcgtcgtggtggagaacatccaccgccacctggccctgggcgcggac
aatctgttggaggccatccccaaggcggtggacgaggtgggcggaccgaccattctggcc
accttcaccgtcatcgccgcgttgctgcccatggcctttgtcaccggcctgatggggccc
tatatgagcccgatcccgatcaacgcatccatgggcatgctcatctccctggtggtggcc
tttgtcgtcaccccctggatgacctatcagggtctgcgccgggtcgcccatcgctatgca
ggcgatgccagccatgggcatggcggcggctcgccggggctggagcgcttctttggccgg
gtgatcaaccccttcgtgctgggtcaggccgcaaggcgcaaccgctggctgctgctcggc
ggcatactgctgctgattgccctgtccatcggcctggccggggccaagctggtggtgctg
aagatgctgccgttcgatgataagtcggagtttcagatcgttgtcgatagggacgagggc
gtcagcctggagcagaccgcgcgggtggtcaacgaactgggcgattacctgcgtcaggtg
cccgaggtgatgaactatcaggcctacgtcggtaccgcagcacccatcggcttcaacggc
ctggtgcgtcagtactacctgcgcgagggtgcccatgtggccgatctgcaggtgaatctg
gtggacaagggccagcgcaaccgcaagagccatgagatcgccctgtcggtgcgcgagccc
ctgcaggccataggccgcaaatacaacgccaacgtcaagatcgtcgaggtgccgccaggc
ccgccggtgcaatcacccctggtggcggagatctacggcctggactacacaggccagatc
gccatggcgcgccaggtacgggcgcagttcgagcagaccgccgacatcgtcgatgtggac
gacagcgtcgagcacccggcggccaaattcctggtgcaggtggaccggcaaaaggccagc
ctgctcggcgtgccccaggccgaggtggcccgcgccctggccacggtgctgggcggcgag
gacgccggctttctgcacggcgaaaacatgaaatacgccgtgcccatccgcatcgaatac
agcgaggccgacaaggccgacctggatcaggtgctgtcactgcgggtgcgcgccctgtct
ggcagcctggtgcccctgtcggagatcgtcaaggtgatccccaccacccgccagcactcg
atccagcacaaggacctgctgcctgtggtctatgtcaccggcgacatggcggggcagacc
gacagcccgctgtacggcctgtttgatatagtcgccgggctcaagcaagaactgccgggg
ctggagcagtccttcatcaacgcgccagagaacccctacgactacagcctgaagtgggac
ggtgagtggcagatcacctacgagaccttccgcgacatgggcatagcctactcggtgggg
ctgatcctgatctatctgctggtggtggcccagttccgctcctacctggtgccgctggtg
atcatggcgccgatcccgctgaccctgatcggcatactccccggccacgccctggccggg
gcccagttcaccgccacctcgatgatcggcatgatcgccctggccggcatcatagtacgc
aactccatcctgctggtggacttcatcaacgagcagacccgcgccggcatggccttctcc
agggccgtggtgcaggcggcggcggtgcgctccaagcccatagtgctgaccggcctggcg
gccatggccggggccttttttatcctggatgaccccatcttcagcggcctcgccgtggcc
ctgatcagcggcatcctggtctctaccgtgctcaccctggtggtgatcccggtggtctat
tacgcggcgatggagaaacgcttgggttaa
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