Mycolicibacterium fortuitum: XA26_23300
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Entry
XA26_23300 CDS
T04105
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03030
DNA replication
mft03410
Base excision repair
mft03420
Nucleotide excision repair
mft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XA26_23300
03410 Base excision repair
XA26_23300
03420 Nucleotide excision repair
XA26_23300
03430 Mismatch repair
XA26_23300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mft03032
]
XA26_23300
03400 DNA repair and recombination proteins [BR:
mft03400
]
XA26_23300
Enzymes [BR:
mft01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
XA26_23300
DNA replication proteins [BR:
mft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XA26_23300
DNA repair and recombination proteins [BR:
mft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
XA26_23300
NER (nucleotide excision repair)
GGR (global genome repair) factors
XA26_23300
MMR (mismatch excision repair)
DNA ligase
XA26_23300
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
XA26_23300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ALI26175
UniProt:
A0A0N7H8G7
LinkDB
All DBs
Position
2360322..2362415
Genome browser
AA seq
697 aa
AA seq
DB search
MTSNDAGDADLRRRWQELAEEVRGHQFRYYVKDAPVISDADFDALLRQLQALEDEHPELR
TPDSPTQLVGGAGFATEFAPAEHLERMLSLDNVFDSDELSAWAARIKGETGDAAHFLCEL
KIDGVALALVYRNGRLVRAATRGDGRSGEDVTLNARTISDIPEQLTPSDEFPVPDVLEVR
GEVFFRVADFEELNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRKLRMICHGLGYAE
GFSPASLHDAYRALGQWGLPVSAYTAKVSGVAAVAERIAYWGEHRHDVDHEIDGLVVKVD
EVALQRRLGSTSRAPRWAVAYKYPPEEATTKLLDIRVSVGRTGRVTPFAYMEPVKVAGST
VGLATLHNATEVQRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGTERPFVMPANCPECG
TRLAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGYEAATALLQAGVIADE
GDLFTLSAEQLLRTELFTTKAGELSANGKRLLANLDKAKAQPLWRVLVALSIRHVGPTAA
RALATEFASLDAIIEASEERLAAVEGVGPTIAAAVVDWFTVDWHRAIVDKWRAAGVRMAD
ERDASIERTLEGLSIVVTGSLPGFSRDQAKEAIISRGGKAASSVSKKTAYVVAGDAPGSK
YDKAVELGVPILDEDGFRALLAEGPPPAADEATPDEG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcgaacgacgctggagacgctgacctgcgacgacgttggcaggaactcgcagaa
gaggtacgggggcatcagttccggtactacgtcaaagacgcgccggtcatctccgacgcg
gacttcgatgcgctgctgcggcaattacaggcgctcgaggatgagcaccccgaactgcgc
accccggattccccgactcaactggtcggcggcgccgggttcgccaccgaattcgccccg
gcagagcacctggaacggatgctgtccctggacaacgtgttcgattccgacgagctctcg
gcctgggccgcccgcatcaagggggagacgggtgacgccgcgcacttcctgtgcgagctg
aagatcgacggcgtcgcgctggcgctcgtgtaccgcaacgggcggttggtgcgcgcagcc
acccgcggtgacggccgcagcggcgaggacgtgacgctcaacgcccgcaccatttccgac
atcccagagcaactgacaccgtccgacgagtttccggtacccgacgtgctggaggtgcgc
ggtgaggtgttcttccgggtcgccgatttcgaggagctcaacgcggggctggtcgccgag
ggcaagcctccgttcgccaacccgcgcaacagcgcggcgggctcgctgcggcagaagaat
cccgctgtcaccgcgcggcgcaaactgcggatgatctgccacgggctgggttacgccgaa
ggcttcagccccgcctcgttgcatgacgcctaccgggcgctgggccagtggggcctgccc
gtatccgcgtacaccgcaaaggtttccggcgtcgccgcggtcgccgagcggatcgcctac
tggggtgagcaccgccacgacgtcgaccacgagatcgacgggctggtggtcaaggtcgac
gaggtggcactgcagcgccggctcggctcgacgtcccgcgcgccgcgctgggcggtggcc
tacaagtacccacccgaagaggccaccaccaaactgctcgacatccgggtgagtgtgggg
cggaccgggcgggtcaccccgttcgcctacatggagccggtcaaggtggccggctcgacc
gtcggcttggccacgctgcacaatgccaccgaagttcagcgcaagggcgttctgatcggc
gacaccgtggtgatccgtaaggcgggcgacgtcattcccgaggtgctcggcccggtggtc
gatctgcgcgacggcaccgagcggcccttcgtgatgccggccaactgtcccgagtgcggc
acccggctcgcaccggccaaggagggcgacgccgacatccgttgcccgaacacccgtagt
tgcccggcgcagctgcgggagagggtgtttcacgtcgccggccgcggcgcattcgacatc
gaggggctcggctacgaggcggccaccgcgctgctgcaagccggggtgatcgccgacgaa
ggcgatctcttcacactgagcgccgaacagttgctgcgcaccgagctgttcacgacgaag
gcgggcgaactgtcggccaacggcaagcggttgctggccaatctggacaaggccaaggcc
cagccgctgtggcgggtgctggtcgcgttgtcgatccgacacgtgggccccaccgcggcg
cgtgcgctggccaccgagttcgccagcctggacgccatcatcgaggcgagcgaagagcgg
ctggcggcggtggaaggcgtgggcccgacaatcgctgcggcggtggtcgactggttcacc
gtcgactggcaccgcgccatcgtcgacaaatggcgcgccgccggcgtgcggatggccgac
gaacgcgatgccagcatcgagcggacgctggaaggactttcgatcgtggtgaccgggtcg
ttgccgggcttttcccgcgatcaggccaaggaggccatcatcagccgcggcggcaaggcg
gccagttcggtgtccaagaagaccgcctacgtggtcgccggagatgctcccggctccaag
tacgacaaagctgtcgaactcggggtgccgatcctggacgaggacggcttccgggccctg
ctggccgagggcccgccgccggcagcagacgaggcaacacccgacgagggttag
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