Megamonas funiformis: GXM21_05380
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Entry
GXM21_05380 CDS
T06475
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mfun
Megamonas funiformis
Pathway
mfun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXM21_05380 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_05380 (nth)
Enzymes [BR:
mfun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GXM21_05380 (nth)
DNA repair and recombination proteins [BR:
mfun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GXM21_05380 (nth)
Prokaryotic type
GXM21_05380 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
UbiD_N
HHH_8
DUF763
Motif
Other DBs
NCBI-ProteinID:
QIB59839
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All DBs
Position
1090320..1090958
Genome browser
AA seq
212 aa
AA seq
DB search
MKITKKIKDEMLEILETTYKDAKPALIFNNPFELLIAVILSAQCTDKRVNITTARLFAKA
NTPEKILEMGVTALEEEIRDCGLFRNKAKNIIATCHKLCSDYNGEVPEQFEELLKLPGVG
RKTANVVSSIAFNRPAIAVDTHVFRVSNRLKLAVGNTPDEVEKGLQKAIPMEKWSDAHHW
LIWHGRKLCRARNPLCGDCPLKDICPSALLQA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataactaaaaaaataaaagatgaaatgttggagattttagaaacgacgtataaa
gatgctaagccagctttaatttttaataatccttttgaattgttgattgcagttatattg
tcagcacaatgtacggataaacgcgtgaatataactacagctcgtttatttgctaaggca
aatactccagaaaagattttagaaatgggtgttactgctttagaagaagaaatacgcgat
tgtggattatttagaaataaggcaaaaaatataatagctacttgtcataaattatgtagt
gattataatggtgaagtgcctgagcaatttgaagaattattgaagttgccaggtgtggga
aggaaaacggcgaatgttgtttcaagtattgcgtttaatcgtcctgctatagctgtggat
acacatgtatttagagtatccaatcgtttgaaattggctgtaggtaatacacctgatgaa
gtggaaaaaggattgcaaaaggcaataccgatggaaaaatggtcagatgcacatcattgg
cttatttggcatggtcgtaaactttgtagagcaagaaatcctctatgtggtgattgtcca
cttaaagatatttgcccttctgcattattgcaagcttga
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