Methanosarcina flavescens: AOB57_006600
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Entry
AOB57_006600 CDS
T05666
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mfz
Methanosarcina flavescens
Pathway
mfz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOB57_006600 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfz03400
]
AOB57_006600 (nth)
Enzymes [BR:
mfz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOB57_006600 (nth)
DNA repair and recombination proteins [BR:
mfz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOB57_006600 (nth)
Prokaryotic type
AOB57_006600 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
5_3_exonuc
RecR_HhH
bacHORMA_1
HHH_8
Prok-E2_E
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AYK14909
UniProt:
A0A660HS05
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All DBs
Position
complement(1460968..1461681)
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AA seq
237 aa
AA seq
DB search
MPEKKPEQSNTQDLVSEYDIPDNTHNFDKIWALLKEEYPDVKPSLNYSNPLELLVATILS
AQSTDVQINKVTEKLFKKYRTVEDYASADLRELENDLYSTGFYKSKAKNIKAAAQIIIEK
YNGEVPKTMEELITLPGVGRKTANIVLARGFGIIEGIAVDTHVKRVSRRLGLTRNSDPVK
IEKDLIALARKEDLDSISMTLIYHGRKICQARKPKCPSCVVNQLCPSSIIFMTRDYL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaaaagccagaacaatcgaatacacaggatctagtctctgaatacgatatt
cctgacaatacacataacttcgacaaaatctgggctcttctaaaggaagagtatcctgat
gtaaaaccttctctcaattattccaatcctcttgaattacttgtggcaacaatactttca
gcccagtcaactgatgtccagattaataaagtgactgagaaattgttcaaaaagtacagg
actgtagaagactatgccagtgcagatctgagggagcttgagaatgacctctattccaca
ggcttttacaaaagcaaggcaaagaacatcaaagccgctgcccagataattattgagaaa
tataatggagaggttccaaaaactatggaagagctgattactttgccaggcgtcggaaga
aaaacagccaatatagtgcttgccaggggatttgggataattgagggaattgctgtagat
acccacgtaaaaagggtttcaagaaggctgggactcaccaggaactccgatcctgttaaa
attgaaaaggatcttatcgcgcttgctcgaaaggaagaccttgactcgatctccatgacc
ctcatttatcacgggaggaaaatctgccaggcaagaaagccaaaatgcccttcctgcgtt
gttaatcagctctgcccttcgagtataatctttatgacgcgagattatttgtaa
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