Mycolicibacterium gadium: MGAD_18540
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Entry
MGAD_18540 CDS
T07053
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgad
Mycolicibacterium gadium
Pathway
mgad03030
DNA replication
mgad03410
Base excision repair
mgad03420
Nucleotide excision repair
mgad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGAD_18540 (ligA)
03410 Base excision repair
MGAD_18540 (ligA)
03420 Nucleotide excision repair
MGAD_18540 (ligA)
03430 Mismatch repair
MGAD_18540 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgad03032
]
MGAD_18540 (ligA)
03400 DNA repair and recombination proteins [BR:
mgad03400
]
MGAD_18540 (ligA)
Enzymes [BR:
mgad01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MGAD_18540 (ligA)
DNA replication proteins [BR:
mgad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MGAD_18540 (ligA)
DNA repair and recombination proteins [BR:
mgad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MGAD_18540 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MGAD_18540 (ligA)
MMR (mismatch excision repair)
DNA ligase
MGAD_18540 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MGAD_18540 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
SnoaL_2
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBZ17519
UniProt:
A0A7I7WIH0
LinkDB
All DBs
Position
complement(1832565..1834673)
Genome browser
AA seq
702 aa
AA seq
DB search
MSPKATPDPKTALAEQSEDAPEADLRRRWQELADEVRDHQFRYYVRDAPIVSDARFDELL
RELQTLEDEHPELRAPDSPTQLVGGAGFATDFTSADHLERMLSLDNVFTPDELAAWAART
KGEIGDAAHYLCELKIDGVALALVYRDGRLDRAATRGDGRTGEDVTLNARTIDDIPEKLT
GTEEFPVPKVLEVRGEVFFRITDFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTAR
RRLRMICHGLGHAEGFKPETLHDAYRALGDWGLPVSTHTAKVKGIDAVTEHIAHWGEHRH
DVEHEIDGVVVKVDEIALQRRLGSTSRAPRWAIAYKYPPEEATTKLLDIKVNVGRTGRVT
PFAFMEPVKVAGSTVSQATLHNASEVVRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGS
EREFVMPTECPECGTTLAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGYE
AAVALLQAGVITDEGDLFTIDSSDLLRTDLFKTKDGNLSANGKRLLVNLHEAKAKPLWRV
LVALSIRHVGPTAARALATEYGTLDAIMAASEEELSVVEGVGPTIAAAVTEWFTVGWHRA
IVDKWRAAGVRMADERDASIERTLEGLSIVVTGSLTGYSRDDAKEAIVVRGGKAASSVSK
KTAYVVAGDSPGSKFDKAVELGVPVLDEDGFTRLLENGPDGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccaaaggcgacccctgacccgaagaccgcgctggccgaacagtcagaagacgcc
ccggaagctgatctgagacgccgctggcaggagctggccgacgaggtgcgggaccatcaa
ttccgctattacgtccgcgacgccccgatcgtctccgacgcccggttcgacgagttgctg
cgtgaactgcagacgcttgaggatgagcaccccgagctgcgggcccctgactcgccgacg
cagttggtcggcggcgccggcttcgccaccgacttcacctccgccgatcatctggaacgg
atgctgtcgctggacaatgtgttcacccccgacgagctcgcggcgtgggcagcacgcacc
aagggcgaaatcggtgacgccgcgcattatctctgcgagctcaagatcgacggcgttgcc
ctggcgctggtgtatcgcgacggacgcctggaccgggcggccacccgcggcgatggccgc
accggtgaagacgtcactctcaatgcgcgaaccatcgatgatatccccgaaaagctcacc
ggcaccgaggaattcccggtgccaaaggtgctcgaagtgcgcggcgaggtgttcttccgc
atcaccgatttcgaagacctcaacgccgggctcgtcgccgagggcaagcctccgttcgcc
aatccccgcaacagcgccgccggctcgctgcgccagaagaatccggccgtcaccgcgcgc
cgcaggctgcggatgatctgccacggcctcggtcatgccgagggcttcaaacccgagacc
ctgcacgacgcgtatcgcgcgctcggggattgggggctgccggtgtccacccacaccgcg
aaggtcaagggcatcgacgccgtcaccgagcacatcgcccactggggcgagcaccggcac
gacgtcgagcacgagatcgacggtgtggtggtcaaagtcgacgaaatcgcgctgcagcgg
cggctcggttccacctcccgcgccccgcggtgggcgattgcctacaagtacccgccggag
gaggcgaccaccaagctgctcgacatcaaggtcaacgtgggccgcaccggccgcgtcact
ccgttcgccttcatggagcccgtcaaggttgcgggttccaccgtcagccaagccacgttg
cacaacgcgtcggaagttgtccgcaagggtgtactgatcggcgacaccgtggtgatccgc
aaggccggcgacgtgattccggaagtgctgggaccggtcgtcgatctgcgtgacggctcc
gagcgcgaattcgtcatgccaacagagtgtcccgaatgcggcaccaccctggcgcccgcc
aaggaaggcgacgccgacatccgttgccccaacacgcgatcgtgtcctgcgcagctgcgg
gaacgcgtgttccacgtcgcgggacgcggcgcattcgacatcgagggcctgggctatgag
gcggccgtcgcactgctgcaggccggtgtcatcaccgacgagggcgacctgttcaccatc
gacagttcagatctgttgcggacggacctattcaagaccaaggacgggaatctgtcggcc
aacggcaaacgattactggtgaatctgcatgaggcgaaagcgaaaccgctgtggcgggtc
ctggtcgccctgtcgattcggcacgtcggtccgaccgctgcgcgggcgctggccaccgaa
tacggcaccctggacgcgatcatggctgcgtcggaggaggagctgtcggtcgtcgagggg
gtgggcccgacgatcgccgccgcggtcaccgaatggttcaccgtcggctggcaccgcgcg
atagtcgacaaatggcgcgcggccggtgttcgaatggccgacgaacgcgacgccagcatc
gagcgcaccctcgaagggctgtcgatcgtcgtcaccggctcgctgacgggatactcccgc
gacgacgcgaaggaggccatcgtcgtgcgcggcggaaaggccgccagctcggtgtcgaag
aagaccgcgtacgtcgtcgccggcgattcacccggctcgaaattcgacaaggccgtcgaa
ctcggtgtcccggttctcgacgaagacggcttcacccggctgctggagaacggaccggac
ggcgtctag
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