Mycoplasmopsis gallopavonis: NCTC10186_00434
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Entry
NCTC10186_00434 CDS
T07093
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgal
Mycoplasmopsis gallopavonis
Pathway
mgal03030
DNA replication
mgal03410
Base excision repair
mgal03420
Nucleotide excision repair
mgal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10186_00434 (ligA)
03410 Base excision repair
NCTC10186_00434 (ligA)
03420 Nucleotide excision repair
NCTC10186_00434 (ligA)
03430 Mismatch repair
NCTC10186_00434 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgal03032
]
NCTC10186_00434 (ligA)
03400 DNA repair and recombination proteins [BR:
mgal03400
]
NCTC10186_00434 (ligA)
Enzymes [BR:
mgal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10186_00434 (ligA)
DNA replication proteins [BR:
mgal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10186_00434 (ligA)
DNA repair and recombination proteins [BR:
mgal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10186_00434 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10186_00434 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC10186_00434 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10186_00434 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
PTCB-BRCT
BRCT_2
DNA_ligase_ZBD
HHH_5
Nlig-Ia
EDR4-like_1st
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
VEU72948
UniProt:
A0A449AZJ6
LinkDB
All DBs
Position
1:516759..518747
Genome browser
AA seq
662 aa
AA seq
DB search
MQNKKQKILNQMNDLISKINTWNKEYYNDNNPSVSDQEYDLALAELKQLEQAYPQLIQSD
SPTLKIGGFADSKFQKYTHQKPMLSLAKAYNLDDVQKFFENTQKALNKQELAYSLEPKID
GLSISLHYQDGQLIKAVTRGDGVIGEDVTENIYQIHSIPKRINNHNYLEIRGEVFLPKTK
FQKLNQELVLSEQKPFANPRNAASGTLRQLDPEIVAKRELDAILYDLVNPELIGLSSQEQ
VLDFLKKEGFQTNPYSFISGDFDFIFNKINEFKDLKNSFEFDCDGFVIKLNEVENWDKLG
STAKFPKYAIAYKYETEEAISQILAIKTTVGRTGKITYVAELEPISLNQTIVQNATLHNY
EFIESMNINIGDDVKVIKSGEIIPKIIALVNKNSQGVLEKVLYCPSCNSLLQEIDENVDQ
FCLNLDCQEKQIKNLIHFVSRPSFNIITLGESYIRLFFEKGFLSDLYSIFNLKEYSQQIL
EIRGFKDKKLDNILSSIEKAKEIELAKALFALGIKHIGAQVAELITQKISKLSDLISLNW
EELSKIDTIGPKIIESLQEYVSKIPNQELLTKLDQILIYKNSKKILDTKLTNLSFVITGT
LSQSRDYFKDKILQNGGKVLSSISKNVDYLLIGENAGSKLEKAQKLEIKIINEDEFLAMI
EK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataagaaacaaaaaattttaaaccaaatgaatgatttaatttcaaaaatcaat
acttgaaataaagaatattataacgataataatccaagtgtttctgatcaagaatacgat
cttgccttagctgagctcaaacaattagaacaagcttatccacagttaattcaaagtgac
tcacccactttaaaaatcggtgggtttgctgattctaaattccaaaaatacacccatcaa
aaaccaatgttatcgcttgcaaaagcatataacctcgatgatgtccaaaagttttttgaa
aatactcaaaaagctttaaacaaacaagaattggcatatagcttagaacctaaaattgat
ggtttatccatttcacttcactatcaagacggtcaattaattaaagcagttacccgtgga
gatggagttattggggaagatgtaactgaaaacatttatcaaattcattcaatccctaaa
agaattaataatcacaactatttagaaattagaggggaagtttttttacctaaaactaaa
tttcaaaaattaaatcaagaattagttctttctgagcaaaaaccatttgcaaacccaaga
aacgctgcttctggaactcttagacaacttgatcctgaaattgttgcaaaaagagaacta
gatgctattttatacgatcttgtaaatcctgaattaattggtttatcttcacaagaacaa
gtcttagattttcttaaaaaagagggatttcaaaccaatccttactcttttattagtgga
gactttgattttatttttaataaaattaatgaatttaaagatttaaaaaatagttttgaa
tttgattgtgatggatttgtaattaaactaaatgaagtagaaaactgggataaattaggt
agtacagctaaatttccaaaatatgccatagcctataaatacgaaacagaagaagcaatt
agtcagattttagcaattaaaacaactgttggacgaacaggtaaaatcacctatgtagct
gaattagaacctatttccttaaatcaaacaatcgtccaaaacgccacacttcataattat
gaatttattgaaagtatgaatattaatattggagatgatgttaaagttattaaaagtggc
gagattatccctaaaattattgcacttgtgaacaaaaatagtcaaggagtgcttgaaaaa
gttctttattgcccatcttgtaattcgcttttacaggaaatcgatgaaaatgttgatcag
ttttgtttaaatttagattgtcaggaaaaacaaattaagaatttaatccactttgtttct
cgtccttcatttaacatcatcactcttggtgaatcttacattcgactgttttttgaaaaa
ggttttttaagtgatttatattcaatttttaacttaaaagaatatagtcagcagatctta
gaaattcgtggttttaaggacaaaaaacttgacaatattctaagtagcatcgaaaaagct
aaagaaatcgaactagcaaaagctctttttgctcttggtattaagcacattggagcacaa
gtggctgaattaataactcaaaaaattagtaaactcagtgatctaatttcattaaattga
gaagaactaagtaaaatagacacaattggtcctaaaattattgaatcacttcaagaatat
gtttctaaaattccaaatcaagagcttttaactaaattagatcaaatcttaatttataaa
aactctaaaaaaattcttgataccaaactgactaatttaagttttgtaatcacaggtaca
ttaagtcaaagtagagattattttaaagataaaattctacaaaatggtggaaaagttctt
tctagtatttctaaaaatgtcgactacctattaatcggagaaaatgcaggaagtaaactt
gaaaaagcacaaaaattagaaattaaaattattaatgaagatgagtttcttgcgatgatt
gaaaaataa
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