Mycoplasmoides genitalium G37: MG_254
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Entry
MG_254 CDS
T00002
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mge
Mycoplasmoides genitalium G37
Pathway
mge03030
DNA replication
mge03410
Base excision repair
mge03420
Nucleotide excision repair
mge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MG_254 (ligA)
03410 Base excision repair
MG_254 (ligA)
03420 Nucleotide excision repair
MG_254 (ligA)
03430 Mismatch repair
MG_254 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mge03032
]
MG_254 (ligA)
03400 DNA repair and recombination proteins [BR:
mge03400
]
MG_254 (ligA)
Enzymes [BR:
mge01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MG_254 (ligA)
DNA replication proteins [BR:
mge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MG_254 (ligA)
DNA repair and recombination proteins [BR:
mge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MG_254 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MG_254 (ligA)
MMR (mismatch excision repair)
DNA ligase
MG_254 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MG_254 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
Nlig-Ia
Lig_C
DUF678
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AAC71474
UniProt:
P47496
LinkDB
All DBs
Position
complement(302846..304825)
Genome browser
AA seq
659 aa
AA seq
DB search
MMDVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQ
RVGGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNINFQTNSKNEFVVEPKIDGVSIS
LTYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIPFTKTIEIRGEIFVDKKTFLAIN
NQLEKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESITTQTMVLEQLKQWK
FPVSDTIRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSPRWA
IAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHNFDYIKTKDIR
INDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIVDEVDQYCTNET
CKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDKKNQVLKLDLKI
GDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKALQHASLENLIS
LNDVGITVAESLYNWFHDPNHLQLIEQLELRQVKTDQLPLKINFETNSIYFQKRFLITGS
FNISRDQIKDLLSAKFDCQFASEVKPTVDFVIAGNKPTLRKINHAKELNIPIINEAIWT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgatggatgtgaaattgaagattcaacagctggttaacttaataaaaaactatgactat
cactactatgttttaagcgaacctttaattgatgattttgagtatgatatgttgtataag
tcactccaacaattagaaaaagatcatcctgatttaatccaaattgattcccctacccaa
agggtgggaggagaagctgtgaagggttttaaaaagttaaaccataacagtccaatgctc
tctttggaaaatgctttttcaactaaagaaattgctaattttattgataatattaacttt
caaacaaactcaaaaaatgaatttgtagttgaacctaaaattgatggagttagtatctct
ctaacttataaaaatggtgttttagttcatgctttaaccagaggagatggaagtgttggg
gaagatgttttaaataatgttaaaaccattaaatctatccctttaacaatccctttcaca
aaaacaattgagattaggggtgagatttttgttgataaaaaaacttttttagcaattaac
aatcaacttgaaaaaccatttgctaatgcaaggaatctagcagcaggtacaatacgtaat
ttaaacagtgaaatcactgcacagcgcaaattaagggcattattttattacatccctaat
ggtttggaagagtcaatcactactcaaactatggttttagaacagcttaagcagtgaaaa
ttcccagttagtgataccatcagggtttttcaaaacaaatttcaattaattaattacttg
gaagcgtttgacaaaaaacgagaacagttaacttttaatcttgatggtttagttattaaa
ctaaacagcttgcttttttatcaacaattaggtgctacaagtaaatcaccacgttgggca
atagcatttaaatttagtcctaaatttgttcaaactaaattaacagcagttcttataacg
attggtagaactggtagagtgaactatactgctaaattagaaagtgttaatttagatgga
acaaaagtaacagctgctactttacataactttgattacattaaaactaaagacattagg
atcaatgacactgttgttatctataaagctggggaaattatccctaaagtactaaaggta
aatcttgaaaaaagaaaaaatgacactatcataattcaagagcaaaaatattgtccttca
tgtaattcaaaactagtcaaaatagttgatgaagttgatcagtattgtaccaatgaaact
tgtaaggagcgaaacatccagttaattaactattttgtttctaaaactgctatggacatt
aacgggttgaatattaatactattaccaaactttatgaacacaatttggttagatctata
gttgatctttatgatttaaaagacaagaaaaaccaagttttaaaattagatctgaagatt
ggtgataaacttttcaacaagttagttgataacattgaaaattcaaaacaaaaaggaatg
gctagattactaacaggacttggtattaagcatgttggtaatgtattagctaagaattta
gctaatcattttaaaaatatcaaagcattacagcatgctagcttagagaacttaattagt
ttaaatgatgtaggaataacagtagctgaatcattgtataactggtttcatgaccctaac
catttgcagttaattgaacaacttgaattaagacaagtaaaaacagatcaattaccactg
aaaattaactttgaaactaacagtatttattttcaaaaacgctttcttattaccggtagc
tttaacattagtcgtgaccaaattaaggatttattatcagctaagtttgattgccagttt
gcaagtgaagtcaaaccaacagttgactttgttattgcaggaaacaaaccaactttaaga
aaaatcaatcacgccaaagaactgaacattcctatcattaatgaagcaatttgaacatag
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