Mycoplasmopsis glycophila: NCTC10194_00076
Help
Entry
NCTC10194_00076 CDS
T06765
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgly
Mycoplasmopsis glycophila
Pathway
mgly03030
DNA replication
mgly03410
Base excision repair
mgly03420
Nucleotide excision repair
mgly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10194_00076 (ligA)
03410 Base excision repair
NCTC10194_00076 (ligA)
03420 Nucleotide excision repair
NCTC10194_00076 (ligA)
03430 Mismatch repair
NCTC10194_00076 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgly03032
]
NCTC10194_00076 (ligA)
03400 DNA repair and recombination proteins [BR:
mgly03400
]
NCTC10194_00076 (ligA)
Enzymes [BR:
mgly01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10194_00076 (ligA)
DNA replication proteins [BR:
mgly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10194_00076 (ligA)
DNA repair and recombination proteins [BR:
mgly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10194_00076 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10194_00076 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC10194_00076 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10194_00076 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
BRCT
HHH_2
PTCB-BRCT
BRCT_2
HHH_5
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
VEU70081
UniProt:
A0A449AU81
LinkDB
All DBs
Position
1:complement(112654..114645)
Genome browser
AA seq
663 aa
AA seq
DB search
MSSQQEKIQKKIESLTNLINKWNKEYYVENNPSVSDQEYDEALLELEELEKQFPRFILAN
SPTLSVGGFAENKFAKYTHEKPMLSLAKAYSLDEVGRFFDNTSKALNDNNLSYSLEPKID
GLSIALHYNNGVLEKAVTRGDGVIGEDVTENIYQIQTIPKKINYLSKIEIRGEVFLPKTR
FEELNKQLAAKDQKTFANPRNAASGTLRQLDPEIVKERKLDAILYDIVSPIEHNLKTQKE
ALDFLKKNHFNVNPYSFISSDREFILRKIEEFKAIKNNFEFDCDGFVIKLDNVTMWDSLG
ATAKFPRYAIAFKYETEEAISTIINIKTTVGRTGKITYVAELEPVSLNQTIVRNATLHNY
DFIDTMNINLGDEVKVIKSGEIIPKIIGLVKKNSNSIFPKVLNCVSCGSLLIEIDDNVDQ
FCMNDECSEKQIKNLIHFVSRPAMNILTLGESNIRTFFELGFLSDIPSVFELFKYKDQII
QLPSYKEKKTDNILNSIEASKEIFLYKALFALGIKHIGAQIAEIIAQKINKLSDLINLDF
ETLSEINTIGPKIIDSLREYVSNPKNQEILVRLDEVLVYKQNKKNESELFSGLVFVITGT
LSKTRDYFKNLIEQNGGKVASAVSKNVNYLLAGENAGSKLDKAQKIGVNVINEEELNKLL
TPK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacaacaagagaaaattcaaaaaaagatcgaatcactcactaacttaatcaac
aaatgaaacaaggaatactacgtcgaaaataacccttctgttagcgaccaggagtatgac
gaagcgctccttgaattagaagagttggaaaaacagtttcctcgttttatcttggctaat
tcgccgacattgagtgttggcggttttgctgaaaataaattcgctaaatacactcatgaa
aaaccaatgctttcgcttgctaaagcttatagtttagatgaagtgggtagattctttgat
aacacatctaaagctttaaatgataataatttaagctatagccttgagccaaaaattgac
ggtttatcaattgcgcttcactataataatggtgttttagaaaaagctgttacaagagga
gatggtgtaattggagaagatgtcactgaaaatatttatcaaattcaaactattcccaaa
aaaattaattatctttctaaaatagaaattcgtggagaagttttcttaccaaaaacccgt
tttgaagagcttaataagcagctagctgcaaaagatcaaaaaacatttgctaacccaaga
aatgcggcaagcgggacgttaagacaacttgatcctgaaatagtaaaagaaagaaaactt
gatgctattttatatgatattgtaagtccgattgagcacaatttaaaaacccaaaaagaa
gcacttgatttcttaaaaaagaatcactttaatgttaatccttattcttttatttcttcc
gatcgtgaatttatcttaaggaaaatagaagaatttaaagcgatcaaaaataactttgaa
tttgattgtgatggttttgttattaaactagacaatgtaactatgtgagatagtttagga
gcaacagctaaatttccaagatacgcaattgcttttaaatacgaaactgaagaagcaatt
tcaacaattataaatattaaaacaacagttggccgtactggcaaaattacttacgtagca
gaattagaaccagtttccttaaatcaaacaatagtacgtaatgcgacattacataattat
gattttattgacactatgaatattaatttaggtgacgaagttaaagtaataaaaagtggc
gaaatcattcctaaaattatcggtttggttaagaaaaattctaactctatctttccaaaa
gttttaaattgcgttagttgcggtagcttacttattgaaatagatgataatgttgatcaa
ttttgtatgaacgatgaatgtagtgaaaaacaaattaaaaacttgattcactttgtttct
cgtccagcaatgaatattttaactcttggtgaatcaaatattcgcacattctttgaactt
ggatttttaagtgatattccgagtgtctttgaactttttaaatataaagatcaaattatt
cagttaccaagttataaagagaaaaaaacagataacattttaaatagcattgaagcttca
aaagaaattttcttatacaaagccctttttgcattaggtataaaacatattggtgcacaa
attgctgaaataattgctcaaaaaattaataaactctctgatttaattaatctagatttt
gaaaccttaagtgaaattaacacaattggcccaaaaataattgattcactacgtgaatat
gtctcaaatccaaaaaatcaagaaatattagtaagattagacgaagttttagtttataaa
caaaacaagaaaaacgaaagtgaattgttttctggtttagtctttgtaattacaggaaca
ctgtctaaaaccagagattactttaaaaatctaattgagcaaaacggcggtaaagttgca
agtgctgtttctaaaaatgtaaattatcttctagctggagaaaatgccggaagtaaactt
gacaaagctcaaaaaataggcgtcaatgttattaatgaagaagaactaaataaattatta
acaccaaaataa
DBGET
integrated database retrieval system
