Muribaculum gordoncarteri: E7746_08410
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Entry
E7746_08410 CDS
T10108
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgod Muribaculum gordoncarteri
Pathway
mgod03030
DNA replication
mgod03410
Base excision repair
mgod03420
Nucleotide excision repair
mgod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7746_08410 (ligA)
03410 Base excision repair
E7746_08410 (ligA)
03420 Nucleotide excision repair
E7746_08410 (ligA)
03430 Mismatch repair
E7746_08410 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgod03032
]
E7746_08410 (ligA)
03400 DNA repair and recombination proteins [BR:
mgod03400
]
E7746_08410 (ligA)
Enzymes [BR:
mgod01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
E7746_08410 (ligA)
DNA replication proteins [BR:
mgod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E7746_08410 (ligA)
DNA repair and recombination proteins [BR:
mgod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
E7746_08410 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E7746_08410 (ligA)
MMR (mismatch excision repair)
DNA ligase
E7746_08410 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E7746_08410 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
HHH_8
PTCB-BRCT
BRCT_2
RecR_HhH
SpoOE-like
Motif
Other DBs
NCBI-ProteinID:
QCD35899
UniProt:
A0A4P7VQ22
LinkDB
All DBs
Position
1903650..1905662
Genome browser
AA seq
670 aa
AA seq
DB search
MDAAKQIENLRKELNRHNYNYYVLNAPEISDRDFDMMMKELEKLEHEHPELDDPYSPTHR
VGSDINKAFEQHVHQRPMLSLGNTYSIAEVDDFLHRTRESLMGEEFSIVGEMKFDGTSIS
LTYRDGRLVRAVTRGDGERGDIVTDNVMTIKSVPLQLNGSGWPQEFEIRGEIVLPWKAFD
RLNAEREFNEEPLFANPRNAAAGTLKMQNSAEVARRGLDAVFYYLLGDNLPCDNHYDNMM
EARKWGFKVSSEMKLLHSIEEVDRFIEYWDTARKELPVATDGLVFKVNNLRQQLNLGYTA
KSPRWAIAYKFQAERALTQLRFVSFEVGRTGVVTPVANLEPVLLSGTIVKRASLHNADIV
RTLDIHEHDMLYVEKGGEIIPKITGVDTDSRLPDAKPVTFVTDCPICGTRLVRVEGEAAW
MCPNKWGCPPQICGRIEHFVGRRMMNIEGIGEEIVVILYQNGWVNDIADLYDLHTHRTEI
EALPGFGPRTADRMIDGIEASRQVPFERVMYALSIPFVGETVAKKLARSLGDIDSVMNAG
VEALTAIDDIGPRIAESVQEYFNNPVNRDIIERLRRAGVQMSMPKRDDADSSDRLAGKSI
VISGTFSKHSRDEYKDMIERHGGKNVSSISKKTDYLLAGENMGPAKLQKATSLNIPIIDE
DTFLKMIEND
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagccaagcaaatcgaaaacctgcgcaaggaacttaaccgacacaattataat
tactacgtgttgaacgcccccgaaatatcggatcgcgacttcgacatgatgatgaaggag
cttgagaagctcgaacatgagcatcccgaactcgacgacccctactcccccacccatcgt
gtaggcagcgacatcaacaaggcatttgagcagcatgttcatcagcgccccatgctgtcg
ctcggcaacacctactccatcgcggaggtcgacgatttcctgcatcgtacacgcgaatcg
ctcatgggcgaagagttcagcatcgtgggagagatgaaatttgacggtacatcgatttcg
ctcacctaccgtgacggacgactcgtgcgcgccgtgacacgcggcgacggagagcgcggc
gacatcgtgaccgacaatgtcatgaccatcaagagcgtgccgctgcagcttaacggaagc
ggctggccgcaggagtttgagattcgcggcgagatagttctgccgtggaaggcatttgac
cgcctcaacgccgaacgcgagttcaacgaggagccgctctttgccaatccgcgcaacgcc
gccgccggaacacttaagatgcaaaattcggccgaagtggcccgtcgcggcctcgatgcg
gtgttctactacctgctcggcgacaatctaccctgcgacaaccactacgacaacatgatg
gaggcacgcaaatggggattcaaggtatcatccgagatgaagctgctccactcaatcgag
gaggtcgaccgattcatcgaatattgggacacggcgcgaaaggagttgcccgtagccacc
gacggccttgtgttcaaggtcaacaatctgcgccagcagctcaatctcggctacactgcc
aagtcgccgcgctgggccatcgcctacaagttccaggccgaacgcgccttgacccaactg
cgattcgtgtcatttgaggtaggacgcacgggagtggtaacccccgtggccaatcttgaa
cccgtgctgctatcgggcaccatcgtgaagcgtgcgtcgctccacaacgccgacattgtg
cgcaccctcgacattcacgagcacgacatgctttatgtcgaaaaaggaggcgagataata
cccaagataaccggtgtcgacaccgacagccgactgcccgatgcaaagcccgtgacattc
gtgaccgactgccctatatgcggcacgcggcttgtgagggtcgaaggcgaggcggcgtgg
atgtgtcccaacaaatggggttgcccgccccagatatgcggccgaatcgagcacttcgta
ggccggcgcatgatgaacatcgaaggcatcggcgaagaaattgtggtaatcctctatcag
aacggctgggttaacgacatcgccgacctctacgacctgcacactcatcgcaccgagata
gaagcactgccgggattcggcccccgcaccgccgaccgaatgatcgacggcatcgaagcc
tccaggcaggtgccctttgagagggtcatgtatgcgctctcaatcccattcgtgggcgaa
accgtagccaagaaactggcccgctcgctcggcgacatcgacagcgtgatgaacgccgga
gtcgaagcgctcaccgcaatcgacgacataggcccgcgcatagccgaaagcgtgcaggag
tacttcaacaaccccgtaaaccgtgacatcatcgagcgtcttaggcgagccggagtgcag
atgtcgatgcccaagcgcgacgatgccgacagctccgaccgtcttgcaggcaaaagcatc
gtgataagcggcaccttcagcaagcattcacgcgacgagtacaaggacatgatcgagcgt
cacggaggcaagaacgtaagttcgatttccaagaagaccgactatctgttagccggcgaa
aacatgggccccgccaaattgcagaaagcgacttcgctcaacattcccattatcgacgag
gacacattcctcaaaatgatagaaaatgactaa
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