Mucilaginibacter gotjawali: MgSA37_04207
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Entry
MgSA37_04207 CDS
T05131
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgot
Mucilaginibacter gotjawali
Pathway
mgot03030
DNA replication
mgot03410
Base excision repair
mgot03420
Nucleotide excision repair
mgot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MgSA37_04207 (ligA)
03410 Base excision repair
MgSA37_04207 (ligA)
03420 Nucleotide excision repair
MgSA37_04207 (ligA)
03430 Mismatch repair
MgSA37_04207 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgot03032
]
MgSA37_04207 (ligA)
03400 DNA repair and recombination proteins [BR:
mgot03400
]
MgSA37_04207 (ligA)
Enzymes [BR:
mgot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MgSA37_04207 (ligA)
DNA replication proteins [BR:
mgot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MgSA37_04207 (ligA)
DNA repair and recombination proteins [BR:
mgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MgSA37_04207 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MgSA37_04207 (ligA)
MMR (mismatch excision repair)
DNA ligase
MgSA37_04207 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MgSA37_04207 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Nlig-Ia
RNA_ligase
HHH
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
BAU56015
UniProt:
A0A0X8X5L4
LinkDB
All DBs
Position
4635984..4638101
Genome browser
AA seq
705 aa
AA seq
DB search
MCTVIAVHITHNQFHFILSSCFFITFPLKTYLRSMSPAEAKNRIETLSSEIKQHNYNYYV
LAMPSISDFDFDKKLEELVQLEKQFPEFADPDSPTQQVGGFITKEFITVKHKWPMLSLGN
TYNEQELLDFDQRIRKAIGDNFEYVCELKFDGLSMSLTYEQGKLVRAVTRGDGVQGDDVT
ANVRTINTIPKKLHQSDFPQHFEIRGEVFMHLKAFERLNNERVENGETPYANPRNFASGT
IKMQDSAEVAKRPLDCFLYFLYTDNIIYKTHWESLQAVKNWGFQVNEHSRLCHTINDVFE
FINLWDKKRFGLSYDIDGIVIKVNSYAQQQELGFTAKSPRWAIAYKFKAEQAETELLSVS
YQVGRTGAVTPVANLKPVFLAGTTVKRATLHNADEIEKRLKLHTGDWVYVEKGGEIIPKI
TGVNLDKRKPGAEAIAYITSCPACGTLLERKEGEAAFYCPNDEGCPPQIVGKMQHFIDRK
AMNIDGLGDETIETLYQKGFINHISDIYSLKDHSGELKLMDRFGEKSITNMLEGIEKSKE
MPFDKVLFGLGIRYVGATVAKKLAVHFKNVDKLAAASFDELITAEEIGERIAISILDYFK
DERHKEEIEKLKAHGLQFVTEEKEVSLASETLSGKTFIISGVFAKYSRDELTNIIEQNGG
KIVSSISAKLNYLVAGDNMGPAKLEKATKLNIPIITDDDLLAMIG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactgttatagcagtgcacataactcacaaccagtttcattttatcctttcttcg
tgtttttttataactttcccactaaaaacttatcttcgttccatgtcaccggcagaagca
aaaaaccgaatagaaaccctttcgtcagaaatcaaacagcataattacaattattatgta
ctggctatgcccagcatttctgatttcgacttcgataaaaaactggaagaacttgtccaa
ttggaaaaacagttccccgaatttgctgaccccgattctcctacccaacaggttggcggc
tttattaccaaagagtttatcacggtaaagcataaatggcctatgttatcgctggggaat
acctataacgagcaggaactgctggattttgaccagcgcatacgcaaggctattggcgat
aactttgaatatgtttgtgaattaaagtttgacggcttatccatgagcctaacttacgaa
cagggcaaactggtacgcgcagtaacgcggggcgacggcgtacagggtgatgatgtaaca
gccaatgttcgcacgataaatactattcccaaaaagttacatcaaagtgatttcccccaa
cattttgaaataaggggtgaagtatttatgcacctgaaagcatttgaacgcctgaataat
gagcgcgtagagaacggcgaaacaccttatgccaacccacgcaacttcgcgtcaggcacc
atcaaaatgcaggattcagcggaggttgcgaaacggccgctggattgtttcctctatttt
ttatataccgataatattatctataaaacccattgggaaagcttgcaggcagtaaaaaac
tggggcttccaggtaaatgaacacagcaggctctgccatacaataaatgatgtttttgaa
ttcatcaatctatgggacaaaaaacgctttggattgagttatgacatcgacggaatagtt
attaaagtaaacagctacgcacagcaacaggagctgggttttacggccaaatcgccccgt
tgggccatcgcctataaatttaaagccgagcaggccgaaacggagttactttcagttagc
taccaggtaggtcgcaccggcgccgttacgcctgtagccaatttaaaacctgttttttta
gccggcaccaccgtaaaacgtgccacgctgcacaacgccgatgaaattgaaaaacggcta
aagttgcataccggcgattgggtatacgttgaaaaaggcggcgagatcatccctaaaatt
acgggcgtaaatttagataagcgcaaacccggtgcagaagctattgcctatattaccagc
tgcccggcttgcggtactttgcttgaacgaaaagaaggcgaagcagctttctattgcccc
aacgatgaaggctgcccgccgcagatagtgggtaaaatgcagcattttattgaccgaaag
gccatgaatattgacgggctgggcgatgaaaccatcgaaacgctttaccaaaaagggttt
atcaaccacatcagtgacatttatagcttaaaggatcatagcggggaactgaaattgatg
gaccgtttcggcgaaaaatccatcaccaatatgttggaaggtattgaaaaatcgaaagaa
atgccttttgataaagtgctgtttggccttggcatccgctatgtgggcgctaccgttgcc
aaaaaactggcggtgcattttaaaaacgtagataaactggcggctgcttcctttgatgaa
ctgattactgctgaggagatcggcgagcggattgccatcagcatattagattactttaag
gacgaacgccacaaggaggaaattgaaaaactaaaagcccatggcctgcagtttgtgact
gaagaaaaagaggtgagcctggccagtgaaacacttagcggcaaaacgtttatcatcagc
ggcgtatttgccaaatactcacgggacgaactcaccaatatcatagagcaaaacgggggc
aaaattgtgagcagcatctcagctaaactcaattacctggtagccggcgataacatgggg
cccgccaagcttgaaaaagcaaccaaactgaatattcctattattacagatgatgatttg
ctggcgatgatcggataa
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