Meleagris gallopavo (turkey): 100541021
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Entry
100541021 CDS
T01523
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mgp04040
]
100541021 (SCN4A)
Ion channels [BR:
mgp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100541021 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Protocadherin
DUF892
Motif
Other DBs
NCBI-GeneID:
100541021
NCBI-ProteinID:
XP_031412911
Ensembl:
ENSMGAG00000008768
LinkDB
All DBs
Position
29:complement(1976863..2005717)
Genome browser
AA seq
1705 aa
AA seq
DB search
MFIMITILTNCVFMTMSNPPAWSKNVEYTFTGIYTFESLVKILSRGFCINDFTFLRDPWN
WLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLVGDFGLGDTTLANATLYGNFTDGI
DGNFTGNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEGYVCMKTGRNPNYGY
TSYDTFSWAFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVV
AMAYAEQNDATMLEAQQKEEEFQQLMEQLKKHQEEQEKQLQDKQSSSSSLQSSVAGKKSD
SDLNSDQDKAKDCNGQVVPKVVLQRSATVIEFNPANETEKSGSNHLTVGNQDGPGLEKRV
GSAVSVISNTMEELEEAHQKCPSWWYKFAHMFLVWDCCYPWLKLKEFVKLVVMDPFVDLG
ITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWN
IFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFHSFLIVFRILCGEWI
ETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAASDDDGEMNNLQ
IAIGRITRGIDFVKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSVLNHVDSSPDPKPDYM
DGVAGKEYLLMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQSDTEDAKNPLSSDNT
SSLCSTVDYKPPLPEEEEVAEEAEESNEPEECFTEGCVKRFPCLHVDVTSDRGKIWWNIR
KTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIEML
LKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGDLFDIS
VVNNKSDCLALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEE
QPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLNMVTMMVETDDQSETK
TDILYKINLVFIVIFTGECVLKMFALRYYFFTIGWNIFDFVVVILSIAGIVLSDIIEKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
SNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPILNSGPPDCDPNLENPG
SSIKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFY
EIWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILF
ALTKEVLGDSGEMDALKDTMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRY
LLRRSVKQASYMYRHSKDVEALLGDAPEKEGLIATKMHEIYGNSGTDAEVGAAIDLAPVP
SSETQSAPVEAKPAGGQRVVKESLV
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgatcaccattttaaccaactgtgtgtttatgacgatgagcaaccccccg
gcgtggtccaagaacgtggaatacaccttcactggaatatacaccttcgagtccctcgtc
aagatactgtcaagaggtttctgcatcaatgactttacattcctgcgcgacccgtggaac
tggctggacttcatggtcatctccatggcctacatcactgagtttgtggacctggggaac
atctctgctctcagaaccttccgtgtcctccgtgccttgaaaaccatcacggtgatccca
gggctgaagacgatcgtgggggcactgatccagtcggtgaagaagctctcggatgtcatg
atcctcactgtcttctgcctgagcgtcttcgccctcatcggcctccagctcttcatgggg
aacctccggcacaagtgtgtgaggtggccgcccctcaatgacactttggtgggggacttt
gggctgggcgacaccacgttggccaacgcaacgctctacggcaacttcactgatggcatt
gatggcaacttcacaggcaacagcaccttcgattttgaagcctacatcaacgatgaagca
aatttctactttctggagggagcgctcgatgccctgctctgtgggaacagcagcgatgct
gggaagtgcccagaggggtatgtgtgcatgaagacgggcaggaaccccaactatggctac
accagctacgacaccttcagctgggctttcctctccctcttccgcctcatgacacaggac
ttctgggagaacctcttccagctgactctgcgtgcagcagggaaaacgtacatgatcttc
ttcgtggtggtgatattcctgggttccttctacctcatcaacctcatcctggctgtggtg
gccatggcctatgcagagcaaaacgatgccacaatgctggaggcgcagcagaaggaagag
gagttccagcagctcatggagcagctgaagaagcaccaggaggagcaggagaagcagttg
caggacaagcagtccagcagcagttccctgcagagcagcgtggctgggaagaagagcgac
tcggatctgaacagcgaccaggacaaggcaaaggactgcaatgggcaggtggtccccaag
gtcgtgctgcagcgctctgccacggtgattgaattcaacccagccaatgagacagagaaa
tcaggctccaaccatctcaccgtgggcaaccaagatgggccagggctcgagaagagggtg
gggagtgccgtcagtgtcatctccaacaccatggaagagctggaggaagctcaccagaag
tgcccgtcctggtggtacaaatttgcccacatgtttctggtgtgggactgctgctatcca
tggctgaagctgaaggaatttgtcaaactggtggtgatggaccccttcgtggacctgggc
atcaccatctgcatcgtgctcaacacactgttcatggccatggagcactaccccatgaca
gaggagtttgagaacgtgctgactgtggggaacctggtcttcacggggatcttcacagca
gagatggtgctgaagctcatcgctctggacccctatgagtacttccagcagggctggaat
atctttgacagcatcatcgtcacgttgagcctggtggagctggggctggccaacgtgcag
gggctctccgtgctgcgctccttccgcttgctgagagtcttcaaattggccaagtcttgg
cccaccctcaacatgctcatcaagatcatcggcaactcagtgggcgccctcgggaatctg
acactggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggg
aagagctacatggagtgcgtctgcaagatctccctcgactgcacactgccccgctggcac
atgcatgacttcttccactccttcctcattgtcttccgcatcctatgcggcgaatggatc
gagaccatgtgggactgcatggaggtggccggtcagaccatgtgcctcatcgtcttcatg
atggtcatggtcatcgggaacctggtggtgctcaacctgttcttggctttgctgctgagc
tccttcagcgccgacagcctggcagcctctgatgatgatggtgagatgaacaacctgcag
atcgccatcggccggatcaccaggggcatcgacttcgtgaagtcttctgtcctcatgctg
ctccgaaggctgtggaagggcaaaaaggtggccccggaggaagagcaggagcccagcaaa
ggggacaactccgtgctgaaccacgtggatagcagcccggatcccaagccagattacatg
gacggagtcgcggggaaggaatatttgttgatggacgagctggaccacatgaatttcatc
aacaatcccaacctgactgtgcaggtccccatcgcctcggaggagtccgacctctacgag
gagacgagcactcagtctgacactgaggatgccaagaaccccctttccagtgacaacacc
tcatccctgtgcagcaccgtggactacaagccaccgctgcctgaggaggaggaggtggcc
gaagaggctgaagagagcaatgagcccgaggagtgcttcactgaaggctgcgtcaagagg
tttccctgtctccacgtggacgtcaccagtgacagagggaagatctggtggaacatcagg
aaaacctgcttcctcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatc
ctcctcagcagcggggcgctggcctttgaggacatctacatagagcagcggaaggtgatc
cgcaccatcctggagtacgctgataaggtcttctcctacatcttcgtcattgagatgctg
ctcaagtgggtggcctatggcttcaaggtctacttcaccaacgcgtggtgctggctggat
ttcctcatcgtcgacgtctccctcatcagcctgacagccaactggctgggatactctgag
ctgggagccatcaaatctctgcggacactgagagcactgagacctctgcgcgccctgtcc
agatttgaaggcatgagggtggtggtaaacgccttgctgggtgccatcccctccatcatg
aacgtcctgctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctc
tttgcagggaagtactaccggtgcgtcaacaccaccacgggggacctctttgacatcagt
gtggtgaacaataagagcgactgcctggctctcctccacaccaacgaggtcagatgggtc
aacgtcaaagtcaacttcgacaacgtgggcttgggatacctgtccttgctgcaggtggcg
accttcaaaggttggatggacatcatgtacgccgctgtggactcacgtgagattgaagag
cagccagtgtacgagatcaacctctacatgtacatctactttgtcatcttcatcatcttt
ggagccttcttcaccctcaacctcttcatcggcgtcatcattgacaacttcaaccagcag
aagaaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactataat
gccatgaagaagctcggctccaagaaaccccagaagcccatccccaggccctcgaacaag
tttcaagggatggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatc
ctgatttgtcttaacatggtgaccatgatggtcgaaacagacgatcaaagcgagaccaaa
acagacatcctctacaaaatcaacctggtcttcatcgtcatcttcactggagagtgtgtg
ctaaagatgtttgccttgcgctactacttcttcaccattggctggaacatctttgacttt
gtggtggtcatcctctccatcgcaggcattgtcctctcagacatcatagagaagtacttt
gtgtcacccacgctcttcagggtcatcaggctggcgaggatcggccgcgtcctccggctg
atccgaggagctaaaggcatccggacgctgctcttcgctctcatgatgtccctccctgcc
ctgttcaacatcggcctcctgctcttccttgtcatgttcatctactccatctttgggatg
tccaactttgcctacgtgaagaaggaggcgggaattgatgacatcttcaactttgagact
tttgggaacagcatcatctgcctcttccagatcaccacgtcggccggatgggatgggctg
ctcagcccgatcctaaacagcggtccccccgactgcgaccccaacctggagaatcctggc
agctcaataaagggcaactgcggcaacccatccatcggcatcttcttcttctgcagctac
atcatcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttc
aacgtggccacggaggagagcagcgagcccctctgcgaagacgattttgagatgttctat
gaaatctgggagaaatttgacccggatgccacccagttcattgcgtacagcactttgtct
gattttgtggacaccctacaggagccgctcaaaatccccaagccaaacaagatcaagctg
atcaccatggatttaccaatggttgctggggacaaaatccactgcctggacatcctcttt
gccctgacaaaggaagtgttgggggactccggagagatggacgccttgaaggacaccatg
gaggagaagttcatggctgccaacccctcaaaggtctcctatgaacccatcaccaccact
ctgaagaggaaacacgaagaggtgtgcgcaacgaaaatccagcgggcgttccggaggtac
ctgctgaggcgctcggtcaagcaggcatcctacatgtaccggcacagcaaggatgtggag
gcactgcttggggacgcccctgagaaggaaggtctgattgcaaccaaaatgcacgagata
tatgggaacagtgggaccgatgcagaggtgggtgccgctattgatctcgcacccgtcccg
agctcagagactcaaagtgctcccgtagaagcaaagccagcgggtgggcagcgcgtggtg
aaagagtcgttggtataa
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integrated database retrieval system
