Meleagris gallopavo (turkey): 100543025
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Entry
100543025 CDS
T01523
Symbol
AGRN
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04512
ECM-receptor interaction
mgp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100543025 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100543025 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mgp00535
]
100543025 (AGRN)
Proteoglycans [BR:
mgp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100543025 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
EGF
SEA
Kazal_CFAI
Laminin_G_3
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
100543025
NCBI-ProteinID:
XP_010721072
Ensembl:
ENSMGAG00000003375
LinkDB
All DBs
Position
23:complement(2551380..2588725)
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AA seq
1961 aa
AA seq
DB search
MTACQYPMAPGALERDRLYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPN
SYFTQTPPTPRDACRGMLCGFGAVCERSPTDPSQASCVCKKTACPVVVAPVCGSDYSTYS
NECELEKAQCNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCVRSADGQTARCVCPASCSG
VAESIVCGSDGKDYRSECDLNKHACDKQENVFKKFDGACDPCKGILNDMNRVCRVNPRTR
RVELLHRPENCPSKREPVCGDDGVTYASECVMGRTGAIRGLEIQKVRSGQCQHQDKCKDE
CKFNAVCLNRRGTARCSCDRITCDGTYRPVCARDSRTYSNDCERQKAECHQKTAIPVKHS
GPCDLGTPSPCLSVECTFGATCVVKNREPVCECQQVCQGRYDPVCGSDNRTYGNPCELNA
MACVLKREIRVKHKGPCDRCGKCQFGAICEAETGRCVCPTECVPSSQPVCGTDGNTYSSE
CELHVRACTQQKNILVAAQGDCKSCGSTVCSFGSTCVGGQCVCPRCEQQPPAQVCGTDGL
TYDNRCELRAASCQQQKSIEVAKMGPCEDECGSGGSGSGDGSECEQDRCRHYGGWWDEDA
EDDRCVCDFTCLAVPRSPVCGSDDVTYANECELKKTRCEKRQDLFVTSQGACRALTTTPP
PLPVVHCSQTIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGACDPATGQCSCKPGVG
GLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQ
CPNGSKMGMAGCEKDPSAPKSCEEMSCEFGASCVEVNGFAHCECPSPLCSEANMTKVCGS
DGVTYGDQCQLKTIACRQGQLITVKHVGQCHESITHTSHTMPPTPLPTLPLDKLIIPPPL
QLTTRATETTELATSSLLMEASPTARSHPTTRRVTTTRPATTPWMTYGVLKTTVRPLSTS
PVVLATTQPAFAESGSAEGSGDQEMSISGDQESSGAGSAGEEEVEESQVTPTPAIERATC
YNTPLGCCSDGKTAAADAEGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGET
ARSIESALDELFRNSDVKKDFKSIRVRDLGQSSAVRVIVESHFDPATSYTAADVQAALLK
QIRASKKRTILVKKPQQEHVKFMDFDWIPRLFTTTVTTTTATTMAPATTRRHTTASAATT
AHVLHQDIAGHPSAKLAAPVSTRRPTSTLPTTARRKPTRQPPSTTKKPSRPCDSHPCLHG
GTCEDDGKEFTCSCPAGKGGAVCEKHIRYFIPSFGGKSYLAFKMMKAYHTVRIAMEFRAT
ELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITSKVRVEPGKWHQLVVNRNR
RSGMLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATVGLKGCIRLL
DVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGGICHVKEAEMFHCECLHSYTGP
TCADERNPCDPTPCHISATCLVLPEGGAMCACPMGREGEFCERVTEQDHTMPFLPEFNGF
SYLELNGLQTFVPDLQDKMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYLEYR
YDLGKGAAVLRSKEPIPLNTWISVLLERSGRKGVMRINNGERVMGESPVPHAFLNLKEPF
YVGGAPDFSKLARAAAISTSFYGAVQRISIKGVPLLKEQHIRSAVEISPFRAHPCTQKPN
PCQNGGTCSPRMESYECVCQRGFSGAHCEKVIIEKAAGDAEAIAFDGRTYMEYHNAVTKS
EKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVILRST
VPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHK
LPKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHCSAK
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgacggcttgccagtaccccatggcaccgggggccttggaacgggaccggctgtaccag
cacaaggtctccttggtggtgcgctacttcatgatcccatgcaacatttgcctcatcctc
ctggccacctccacgctgggatttgctgtgctgctcttcctcaataactataagcccaat
agttattttacccagactccgccgacccctcgagatgcctgccgagggatgctgtgtggg
ttcggggcggtgtgcgagcgcagtcccaccgacccctcccaagcctcctgtgtctgcaag
aagacagcttgccctgtggtggtggctcctgtctgtggctccgactattccacctacagc
aacgagtgtgagctcgagaaagcccagtgcaaccagcagcggcggatcaaggtcatcagc
aagggaccatgcggctccaaggacccctgtgcagaggtgacgtgcagctttggcagcaca
tgcgtccgttctgcggacggccagacggccaggtgtgtgtgccctgcatcctgcagcggc
gtggccgagagcattgtctgcggcagcgacggcaaggactaccgcagtgagtgtgacctc
aacaagcatgcctgtgacaagcaggagaacgtcttcaagaagtttgatggagcctgtgac
ccttgtaagggcatcctcaatgacatgaaccgcgtgtgccgggtgaatccccgcacccgc
cgggtggagctgctccaccgccccgagaactgtccctcaaagcgggagccggtgtgcggt
gacgacggggtgacatacgccagcgagtgtgtgatggggcgcacgggggccatccggggg
ctggagatccagaaggttcgctctgggcagtgccagcaccaggacaaatgcaaagatgaa
tgcaagttcaatgctgtctgcctgaaccggcgtggcacggcgcgctgctcctgcgaccgc
atcacttgtgatggcacctaccggcctgtctgcgcccgcgacagccgcacctacagcaac
gactgcgagcggcagaaagccgagtgccaccagaaaactgccatcccagtgaagcacagc
ggaccctgtgatctgggtactcccagcccctgcctgagcgtggagtgtacttttggggcc
acctgcgtggtgaagaaccgggagcccgtgtgcgagtgccagcaggtgtgccagggccgc
tatgaccccgtctgcggcagcgacaaccgcacctatggcaacccctgcgagctcaacgcc
atggcctgcgtcctcaagagagagatcagggtgaagcacaaggggccctgcgaccgctgt
ggcaagtgtcagtttggggccatctgtgaagcagagacggggcggtgcgtgtgccccaca
gagtgtgtgccctcctcccagcccgtctgtggcacagatggcaacacctacagcagcgag
tgtgagctccacgtccgagcgtgcacgcagcagaagaacattttggtggctgcccaaggc
gactgcaagtcctgcggcagcacagtgtgctcctttggcagcacgtgtgtgggtgggcag
tgcgtgtgtccccgctgtgagcagcagcccccggcccaggtttgtggcaccgatggcctc
acctatgacaaccgctgcgagctccgagcagcctcctgccagcagcagaagagcatcgag
gtggccaagatggggccgtgtgaggacgaatgtggctcaggaggctcaggctctggtgat
ggcagtgagtgtgagcaggaccgatgccggcactatgggggctggtgggatgaggatgca
gaggacgaccgttgtgtgtgtgacttcacctgcctggcagtgccacgcagcccggtctgt
ggctctgatgatgtgacttacgccaatgagtgtgagctgaagaagacgcggtgtgaaaaa
cgccaggacctctttgtcaccagccaaggagcctgccgtgccctcaccacgaccccaccg
cctctcccagttgtgcactgcagtcagaccatctatgggtgctgcccagacaacatgacc
ctggcacttggtgtcggtgcagccgggtgcccaagcacctgtcagtgcaacccctatggc
tcctatggaggagcctgcgaccctgccacggggcagtgctcctgcaagccaggcgttggg
gggctcaagtgtgaccgctgtgagcctggcttctggaacttccgtggcatcgtcaccgac
agcaagagcggctgcacaccctgtaactgcgacccggtgggctcagtgcgtgatgactgt
gagcagatgactgggctctgctcctgcaagactggtatcactggcatgaagtgcaaccag
tgtcccaacggcagcaagatgggcatggctggctgtgaaaaagacccatcagctccaaaa
tcctgtgaagaaatgagctgcgagttcggggcctcatgtgtggaggtcaacggctttgcc
cactgcgagtgcccgtccccactctgctcagaggccaacatgaccaaggtgtgtggctct
gatggtgtcacctatggggaccagtgccagctgaagaccattgcgtgccggcagggacag
ctcatcacagtgaagcatgtggggcaatgccacgagtccatcactcacacgagccacacg
atgccacccacccctctgcccaccttgcccttggacaagctcatcatacctccaccactg
cagctgaccacccgggctacagaaaccaccgagctggccactagctccctgctgatggaa
gccagccccactgcaagaagtcaccctacaacaagacgtgtcacgacaacccgacctgcc
accacaccatggatgacctatggagtgctgaagaccaccgtccgtccgctctccacctct
ccagtggtcctggccaccactcagcctgccttcgctgaatcaggcagtgcagaaggcagt
ggggaccaggagatgagcatcagtggggaccaggaatccagtggggcaggctctgctggg
gaagaggaggtggaggaaagccaggtaaccccaactccagccattgagagggcaacgtgc
tacaacaccccacttggatgctgctctgatgggaagactgcagctgctgatgcagaaggg
agtaactgtccagctaccaaagtcttccaaggagtcctcatcttggaggaggtggaaggc
caggagctgttttacacgcctgagatggctgaccccaagtcagagctcttcggggagacg
gccaggagcattgagagcgcacttgatgagcttttccgaaattctgacgttaagaaagat
ttcaagagcatccgtgtccgagacctggggcagagcagtgcagtccgtgtcattgtggag
tcccacttcgacccagccacttcctacacggcagctgacgtccaggcggctctgctgaag
cagatcagagcctccaagaagaggaccatcctggtgaagaagccccaacaggagcacgtc
aaattcatggactttgactggatccccaggctcttcaccaccaccgtcaccaccaccaca
gccaccaccatggcacccgcaaccacacggaggcacaccacggcctctgctgccaccaca
gcccacgtcctgcaccaggacatcgcgggtcaccccagtgccaagctggcagcacccgtg
agcaccaggaggcctacatccaccctgcctaccactgcccggcgcaagcccactcgccag
ccccccagcaccaccaagaagccctcgcgaccctgcgactcacatccctgcctgcacggt
ggcacctgtgaggatgatgggaaggagttcacctgcagctgcccagcgggcaaaggagga
gctgtgtgtgagaaacacatcaggtacttcatccccagcttcggtggcaagtcctacctg
gccttcaagatgatgaaggcataccacaccgtgcgcatcgccatggaattcagggccacg
gagctcagcgggctgctgctctacaatgggcagaatcgtggcaaggacttcatctccctg
gcgctggtgggcggcttcgtggagctcaggtttaacacgggctctggcacgggcgtcatc
accagcaaggtgcgcgtggagcctggcaaatggcaccagctggtggtgaaccgcaaccgc
cgcagcggcatgctggctgtggatggggagccccacgtcagcggggagagccccacgggc
accgatgggctcaacctcgacaccgacctctttgttggaggagctcccgaggaccaaatg
gctgtagtggcagagcgtactgcggctacggttggcctgaagggctgcatccgcctcctg
gatgtgaacaaccagatgtatgacctgcgggagaaaggcagcgatgtgctgtatggcagt
ggggtgggcgagtgcggcaacgacccctgccaccccaacccctgccaccatgggggcatc
tgccacgtcaaggaggcagagatgttccactgcgagtgtctccactcctacaccggtcca
acgtgtgctgatgagaggaacccatgcgacccgacgccgtgccacatctctgccacttgc
ctggtgctgccagagggaggtgccatgtgtgcctgtcccatgggacgggaaggagagttc
tgtgagcgagtgacagagcaggaccacaccatgcccttcctcccagagttcaatggcttt
tcctacctggagctgaacgggctgcagaccttcgttcctgacctgcaggacaaaatgtcc
atggaagtggtgttcctggccaagagtcccagcggcatgatcttctacaatgggcagaag
acagatggcaaaggagactttgtgtctctggctttgcacgatggctacctggagtatcga
tacgacctgggcaaaggggcagccgtgctcaggagcaaagagccaattcccctcaacacc
tggataagcgttttgctggagaggagtgggcgcaaaggggtaatgaggatcaacaatggc
gagagggtgatgggagagtcaccggtgcctcatgccttcctgaacctgaaggaaccattc
tacgtggggggagcccccgatttcagcaagctggctcgagctgcagccatctccaccagc
ttctatggagctgtgcagaggatatccatcaaaggggttcccttgctgaaggagcagcac
atccgcagcgccgttgaaatctcccccttccgcgcccacccctgtacccaaaagcccaac
ccatgccagaatggaggcacctgcagcccccggatggagagctacgagtgtgtctgccag
aggggcttctctggggctcactgcgagaaagtgatcattgagaaggcagctggagatgca
gaagccattgcatttgatggtaggacgtacatggagtaccacaacgccgtgacaaagagc
gagaaggctttgcaatccaaccactttgagctgagcatcaaaacagaagccacccagggc
ctgatcctatggagtgggaaggggctggagcgatccgactacatcgccctcgccatcgtg
gatggcttcgtccagatgatgtatgacctgggctccaagccagtcatcctgcggtccaca
gtccccatcaacactaaccactggacccacatcaaagcatacagagtacagagagaaggc
tccctccaggtcggcaacgaagctcccatcactggctcctcgccactgggtgccacacag
ctggacacggacggggccctgtggctggggggaatggagcggctcagcgtggctcacaag
ctgcccaaggcctacagcactggctttattggctgtataagggacgtgattgtcgaccgc
caagaactgcatctggtggaggacgctttaaacaaccccacgatattacactgctcagcc
aaatag
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