Pyricularia oryzae: MGG_09520
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Entry
MGG_09520 CDS
T01027
Name
(RefSeq) CCR4-Not complex subunit Caf16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_09520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_09520
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MGG_09520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_28
AAA_15
AAA_25
AAA_29
AAA_23
AAA_22
DUF3584
RsgA_GTPase
NACHT
Dynamin_N
Phi-29_GP4
ORC-CDC6-like
AAA_14
PduV-EutP
Roc
Motif
Other DBs
NCBI-GeneID:
2680528
NCBI-ProteinID:
XP_003712222
UniProt:
G4N1E4
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All DBs
Position
3:complement(3404532..3406157)
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AA seq
290 aa
AA seq
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MADGSSTPRSPSLEVKDLTYSFPDRSTGISNISLSLPARSRTCLIGANGAGKTTLLRLLA
GKRLSPRGAITVGGVDPFSEGLEGVTYLGLEWVLNPIVRTDIGVAELLRSVGGDAYPARR
DELVEVLDIDTAWRMHAVSDGERRRVQLAMGLVRPWTVLLLDEITVDLDVLSRSGFLDWL
KRETESRDATVVYATHILDNLHAWPTHLVHMHLGTVKEWGPAADFLEAQGASKDGNSQLG
HLVLGWLREDLKDRGPRSQHKRAPEGKSYGAGGIELGGYGYEPKAPPKGQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggaagttccacgccgagatcgccctcactcgaggtcaaagacttgacgtac
agctttccagaccggagcaccggcattagcaacatcagtctttcgctgccagcccggagt
cggacctgcctcatcggcgccaatggagccggcaagacgaccctcctccgcctcctggca
ggtaagcgcctctccccgcgcggcgccatcaccgtgggcggcgtggaccccttctccgag
ggcctcgagggggtgacgtacctggggctggagtgggtgctgaacccgatcgtgcgcacc
gacattggcgtcgccgagctgctccgctcggttggtggggacgcctacccagcgcggcgc
gacgagctggtcgaggtgctggacattgacaccgcgtggcgcatgcacgccgtgtcggac
ggcgagcggcggcgcgtccagctggccatgggcctggtgcggccgtggacggtgctgctg
ctcgacgagatcacggtcgacctcgacgtgctgtctcgttcgggcttcctcgactggctc
aagcgcgagaccgagtcccgcgacgccaccgtcgtctacgccacccacattctcgacaac
ctgcatgcttggcccacccacttggtgcacatgcacctcggcaccgtcaaggagtggggt
cccgccgccgactttctcgaggcccagggtgcctccaaggacggcaatagccagctcggc
cacctggtcctgggctggctgcgggaagacctcaaggaccgcggtccgaggagccagcac
aagagggctcccgagggcaagtcgtatggtgccggcgggatcgagctcggcggatacgga
tacgagcccaaggcaccgcccaaggggcagtaa
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