Pyricularia oryzae: MGG_10627
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Entry
MGG_10627 CDS
T01027
Name
(RefSeq) ATP-dependent DNA ligase domain-containing protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MGG_10627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgr03400
]
MGG_10627
Enzymes [BR:
mgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MGG_10627
DNA repair and recombination proteins [BR:
mgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
MGG_10627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
CATASP
Motif
Other DBs
NCBI-GeneID:
2682230
NCBI-ProteinID:
XP_003710720
UniProt:
G4MQC2
LinkDB
All DBs
Position
1:complement(6553220..6556189)
Genome browser
AA seq
970 aa
AA seq
DB search
MPSPSGFPFAYVCNLLQRCEDNAKQCGPKTNHQFIKEWFASHKRRIADNVDLSALVSTLL
PTKRPDRVYSIQIKRLTSIVARAHHLGRTRVLQLEAWQQPGSGKDFAECVRDVLNDTPNT
CTAPLVTVEEVDEILHHIAARSRFSSPKVQSSVAFSGRTDECHLRLQQLYNRLEPNQAKW
LTRLVLKDYSPVDLSPSHILKGVDPLLPVLLKIYDDLPTAISRMQQRGARGVTTYDDTTG
TMIANLAARFKPILGVKVGRQDWIKARSIKHCMQMGRGRMSIEKKMDGEYCQIHVDISKG
PNCIQIFSKSGKDSTMDRVNLHPAIRTSLKIVYSEKEGKILPFEKIRKHVSRAGTYFHRS
DDDSQAHPWERLMIVYYDALMIDDESLLGVRHSERFKRLKQLVSCSPGVAIIVERKVIDF
DQNGHAASDLRHMFAQCITSHQEGLVLKADDPYFDFGDVRKSYYCCAIKLKKEYIGNFGD
VGDFAIVGARYDPVKAKDYDVPNLRWTHFYVGCLNTDKLQQMERPRFTVVNVVELNNTQM
EYFAKYVSPDYALAEEAPDSAPLLHFERGIDNGKRPSIIFPEPPVFDLRCFSFTREANLA
KHYTMRFPMVSKIHCDRTWRDAVSLDELQEMAKKELNSSQPDDSQELQDWIARLENADPG
RVTGISQESETRQTSQESVDSGCCAPITRHVPTCDSPKQMLRRAATCNLETPSVMDLTMS
PKASLKRSSTVPDARAPKRRLEQIDLNTCSNTSATSDRPVEDVRCPEDANAQVKEKVGAS
DPVMSSFPVDSVGLSSAPDKDVRTNKAGKCKYHGKDCAFKGWLFLLSPCVANFPWVTDDL
LGGHGVHSFETDVAAWNRFLEAEDATIAAARSRQERPRTTKKMIIVDGRRREATQDFLMK
IEMRRKERHEKYGRASMAEVFDWRVLEVVMDRERLTASGKGERRGSRLGKDRCDYEDKEK
IWRKHYVGLV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaccctcgggtttcccgttcgcatacgtgtgtaaccttttgcagcggtgcgaa
gacaatgcgaaacaatgcggaccaaagacgaaccatcaattcatcaaggaatggttcgca
agtcacaagaggcgaatcgccgacaatgtcgacctttccgccctcgtttctacactccta
cccacaaaacgtccagatcgagtctattctatccagatcaagagacttacaagcatagta
gcacgagctcatcatcttggacgcactcgcgtcttgcagctagaagcctggcagcagcca
ggcagcggaaaggattttgcagagtgcgtacgggatgttctcaacgatacgcccaacacg
tgcacggccccgctggtaactgtcgaagaagtcgacgagatactccaccacattgctgct
cgatctcgcttcagctcaccaaaagtacaatcatctgtagcgttttctggtaggactgac
gagtgtcatctccggttacagcaactttacaaccgcctggaacccaatcaagccaaatgg
cttactcgcttggtcctcaaagactactcacctgtggacctgagcccaagtcacattcta
aagggtgtcgatcctctcctccctgtactcctcaaaatatacgatgacctccctaccgcc
atcagtcgcatgcagcaacgtggcgcaaggggagtgacgacttatgacgacactaccggc
actatgattgcaaacctggcagcccgcttcaagccaatccttggcgtcaaagtaggcaga
caagactggatcaaggcacgcagcatcaagcattgtatgcaaatgggccgtggacggatg
agcatcgaaaagaagatggacggcgaatactgtcaaatccatgtcgatatctccaaaggc
cccaactgcatacagatattttccaaaagcggcaaggacagcacgatggaccgcgtcaac
ctgcatcctgcaatcagaacatctttgaagattgtctacagcgaaaaggagggcaagatt
cttccgtttgaaaagatccggaagcacgtctcgcgagccgggacatactttcacagatct
gatgatgactcgcaggctcatccctgggaacgactgatgattgtctactacgacgcgctg
atgatagacgacgagtctctgctgggggtgcgacactctgagaggttcaagcggctcaag
cagctcgtgtcatgcagtccaggcgtggctatcatcgtcgaacgtaaagtcatcgacttt
gatcaaaacggccatgcagcctcggatctacgacacatgtttgctcagtgcatcacatca
caccaagaaggcttggtcctcaaggctgacgatccttattttgactttggagacgtgcgc
aagtcttactactgctgcgccatcaaactcaagaaggagtacattggcaattttggcgat
gttggagattttgccattgtcggcgccagatatgaccccgtcaaggccaaggactacgac
gtgcctaacctcagatggacacacttttacgtcggctgcttgaacacggacaagctacag
cagatggaacgtccacgctttactgttgtcaacgttgtggagctcaacaacactcagatg
gagtattttgcaaaatacgtgagccccgactacgccttggcagaagaagctccggactct
gcaccgcttcttcactttgaacgtggcattgacaacggcaagcgtccgtccatcatcttt
cccgagccgcccgtttttgaccttcgctgcttctcctttactcgagaggccaacctcgca
aagcattacaccatgcggttcccaatggtcagcaagattcactgcgaccgcacctggcgc
gatgctgtcagtcttgatgaacttcaggaaatggccaagaaggagttgaattcttcccaa
cctgacgacagtcaagagcttcaagattggatcgccagactggagaatgcggatcctggt
agagtcacgggaatcagccaagagtcagagacacgtcagacatctcaggaaagcgtcgac
tcgggttgctgtgcaccgatcactcgacatgttcccacctgcgactctcccaagcagatg
cttagacgggcggcgacatgcaatcttgagactccatccgtcatggacctgaccatgtca
ccaaaggcttcactcaagcgcagcagtacagtcccagatgctcgtgctcccaagcgtcgc
cttgaacagatagacttgaatacctgcagcaatacgtctgcaacatctgaccggccggtc
gaggacgtgcgctgtcctgaggatgccaacgctcaggtaaaggaaaaggttggcgccagt
gatccggtcatgtcttcatttccagttgactctgtcggactatcaagtgcaccggacaag
gacgtacggaccaacaaagctgggaaatgtaaataccacggcaaagattgcgctttcaag
ggctggctgttcctcctatctccctgcgtcgccaacttcccctgggtgaccgatgacctc
ctcggcggacacggcgtacacagctttgagacggatgtagcagcatggaatcggttcctg
gaagcagaggatgccaccatcgccgccgctcgctccagacaagaacgcccgaggaccacc
aaaaagatgatcattgtcgacggccggcgcagggaagccacgcaagactttttgatgaag
attgagatgcggcgcaaggagcggcatgaaaagtacggcagggcgagcatggccgaagtg
tttgactggcgggtgctagaggtggtcatggaccgggagcgcctgactgcgagcggaaag
ggggagaggagggggtccagactaggcaaggatcgatgcgattacgaggacaaggaaaag
atttggaggaagcattacgttgggcttgtatga
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