Pyricularia oryzae: MGG_13500
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Entry
MGG_13500 CDS
T01027
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mgr
Pyricularia oryzae
Pathway
mgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MGG_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgr03041
]
MGG_13500
Spliceosome [BR:
mgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MGG_13500
Complex C
U5 SnRNP specific factors
MGG_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
DUF6716
Rep_1
Motif
Other DBs
NCBI-GeneID:
2676944
NCBI-ProteinID:
XP_003716278
UniProt:
G4N746
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All DBs
Position
4:1247315..1251108
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AA seq
989 aa
AA seq
DB search
MDDLYDEFGNFIGEEAEASEEESDHGRDANNYVYDDASEVGADGAGADLMEVDDGRPSNA
VVLHEDKQYYPSAQQVYGEDVETMVQEEDAQPLTQPIIAPVETKKFTVEEADLPPVFFDR
SFMADLMRYPEQTRNIAFAGHLHHGKTSFMDMLVLETHDIGEKLEKRTGKQQNEQLRYTD
VHVLERERGLSLKAAPMSLVLESTKGKSHLFNMIDTPGHVNFVDEVASALRLVDGVCLVV
DVLEGVQINTEQIIKHAVLEDIPMTLIVNKLDRLILELKLPPNDAYFKLKHAIEEVNTII
TDTAVGQPGKAEKWRLSPEKGNVLFACSDMGWCFTLQSFSKFYADTYAPLDHTEFARRLW
GDIYFNPQKRSFTRKPVEEGAKRSFVKFVMEPIYKLFAHSISDSPEELKKVIGSLGITLK
PSQLRSDAQVLLRLVCQQFFGASSGFVDMVVAHIPSPVAAAEGRLQRYYTGPLDTEVAKS
MASCNQDGPLVIQVTKLFSSPDAKTFHSFGRVMSGTATPGAEVRVLGEGYSVDDEEDMAI
ARVSDIWISETKYNIPTDGVPAGNFVLLGGVDNSIVKSATIVDKTFENGEDAYIFKPVTH
FTQSVFKVAVEPINPSELPKMLDGIRKINKSYPLISTKVEESGEHVILGTGELYMDCVLH
DLRRLYADMEIKVSDPVTRFCETVVEESATKCYAITPNKKNRITMVAEPLGDEIARDIET
GAVKIKDPVRKIAKFFQEKHEWDLLAARSIWAFGPEENGPNILQDDTLPTEVDKKLLNTV
KESIRQGFSWATREGPLCEEPIRNTKFKIMDAALSQEAIYRGGGQIIPTSRRACYSSFLM
ASPRLMEPTYAVSMIGSQDSVAQLYNTLARRRGHVLSDGPIAGTPLYRVSGLLPVIDSFG
FETDLRIGSAGSATVSLVFDRWSIVPGDPLDREVVLRPLLPASAQATARDFVLKTRRRKG
LSEDVSVAKFLEPEFHSELISSGILGESM
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttacgacgagttcggcaactttattggggaggaggctgaggcttccgag
gaagagtcggatcacggccgggatgccaacaactatgtctatgatgacgcctcagaagtt
ggcgcagatggcgcaggcgctgatctgatggaggtcgacgatggccgcccttccaacgcc
gtcgttcttcacgaggacaaacaatattacccgtctgcacagcaggtttatggcgaagat
gtcgaaacgatggtacaggaggaagacgcccaaccattgacacagcccattatcgctccc
gtcgagacgaagaaattcacagtggaagaggcagatctgccccctgtctttttcgaccgt
agctttatggccgacctcatgcggtatccggaacagacgaggaatattgcattcgccggc
cacctgcaccacggcaaaacttcttttatggatatgctagttttggaaacgcacgatatc
ggcgagaagctggaaaagcgtaccggcaagcaacagaacgaacagctgaggtacactgac
gtgcacgtcctcgagcgggagaggggactgtcactgaaggcggcccccatgagtttggtc
ctagagagcaccaagggcaaatcgcacctgttcaacatgatcgacacaccaggtcatgtc
aacttcgtcgacgaggtcgcctcggccctgaggctggtcgacggcgtgtgcttagtcgtc
gacgtgctcgaaggagtccagatcaacacggagcagataataaagcatgccgtgttggaa
gacattcccatgacgctcatcgtcaacaagctggacagacttattcttgaactcaaactc
ccacccaacgatgcttactttaaactgaagcacgccatcgaggaggtaaacaccatcata
acagacaccgcggtaggacagcctggaaaagcagaaaaatggcggcttagtccagaaaag
ggcaatgtcttgttcgcctgctcagacatgggttggtgctttacccttcagtccttctcc
aaattctacgcagacacttacgcaccgcttgaccataccgagttcgcccggaggctatgg
ggtgacatctatttcaacccccaaaagcgttctttcaccaggaagccggtcgaggaaggc
gccaaaaggtcatttgtcaaattcgtcatggagcccatatacaagctctttgcccactcc
atcagcgacagcccggaagagctcaaaaaggtgattggtagcctgggaatcacattgaag
ccatctcagctcagatcagacgcccaggtgctactcagattggtctgccagcagtttttt
ggggcctcgtctggcttcgtggatatggtggtggcgcatataccctcacctgtggcagca
gccgagggcaggttacagaggtactacactgggcccttggatacagaagttgccaaatca
atggcttcctgcaaccaggatggcccgttggtaattcaggttacgaaactcttcagctca
ccagatgctaagactttccattcttttggacgagtgatgagcggaactgcgacacctggt
gccgaagtccgcgttcttggagagggctattctgttgatgatgaggaagacatggctatt
gcaagagtatctgacatctggatctctgagacaaagtacaacatacccacggacggggtg
ccggcgggcaactttgttctcctcggtggcgtagacaactcaatagtcaagtcggcgaca
atagtcgacaagacatttgagaacggcgaagatgcctacatcttcaagcccgtcacccat
tttacccaatccgtcttcaaagtcgccgtcgagcccatcaacccttcagaactacccaag
atgctggacggcatccgcaagatcaacaagagctatcccttaattagcaccaaggtcgag
gagtcaggcgagcatgtcattcttggtacgggagagctgtacatggactgtgtgttgcac
gacctaaggcggctgtacgccgacatggagatcaaggtctcggatccggtcacgaggttt
tgcgaaacagtcgtggaagagtctgccaccaaatgctacgccatcacgccaaacaagaag
aacagaatcaccatggtagcagagccgctgggtgatgagatcgctcgcgatatcgagaca
ggagcagtcaagatcaaggatccagtgcgcaagattgccaaattcttccaggagaagcac
gagtgggacctgttagccgcgcggagtatctgggcgttcggtcccgaggagaatgggccc
aacatattacaggacgacacgctgcccacagaagtggacaagaagcttctcaacacagta
aaggagtcaatccgtcaaggtttcagctgggcgactagagaagggccgctctgtgaagaa
ccgatccgaaacacaaaattcaagatcatggatgcagcactatctcaagaggcaatatac
cgcggaggtgggcagatcatccctacttcgcgacgagcctgctactcgtcattcttgatg
gcctcaccacgccttatggagccgacgtacgccgtctctatgattggatcccaggactcg
gtcgcacagctgtacaatacgctcgcgcgccgccgtggccacgtgctctcggacgggccc
atcgccgggacgccgctgtaccgagtcagtggtttactccccgtcatcgactcctttggg
ttcgagacggacctgcggatcggcagcgctggctccgcaacggtaagccttgtctttgac
cgctggagcatcgtgccgggcgacccgctcgaccgtgaggtggtgctgcggcccctgctg
ccggctagcgcgcaggcgacagctcgcgactttgtgctcaagaccaggcgcaggaagggg
ctgagcgaggacgtcagcgtcgccaagtttctggagccagagtttcacagcgagctcatc
tctagcggcattctgggcgagtccatgtaa
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