Pyricularia oryzae: MGG_16841
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Entry
MGG_16841 CDS
T01027
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
mgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MGG_16841
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_16841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_16841
03041 Spliceosome [BR:
mgr03041
]
MGG_16841
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MGG_16841
mRNA degradation factors
5'-3' decay
Lsm complex
MGG_16841
Spliceosome [BR:
mgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MGG_16841
Complex C
U2 snRNP components
MGG_16841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
YopQ
Motif
Other DBs
NCBI-GeneID:
12985068
NCBI-ProteinID:
XP_003712525
UniProt:
G4N3U5
LinkDB
All DBs
Position
3:complement(4330165..4331212)
Genome browser
AA seq
95 aa
AA seq
DB search
MADSGEAQANEPFGLVRLLLDEVVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETHYIQD
EDDESELKTVSRKLEMLFVRGDSVVMISPSDQVAA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcggtgaggctcaagccaatgagccttttggcttggtgaggcttctgttg
gacgaggttgtgtttgtcaagcttcgaggagacagagagctcaagggccgtttgcatgca
tacgattctcattgcaacttggtcctcggtgatgtcgaagaaacacattacattcaggac
gaggacgatgagtcggaactgaagactgtgtcacgaaagcttgagatgttattcgtgaga
ggagacagtgttgtcatgatatcaccatcagaccaggtagcagcatga
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