KEGG   Pyricularia oryzae: MGG_16841
Entry
MGG_16841         CDS       T01027                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
mgr  Pyricularia oryzae
Pathway
mgr03018  RNA degradation
mgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MGG_16841
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MGG_16841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_16841
   03041 Spliceosome [BR:mgr03041]
    MGG_16841
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MGG_16841
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MGG_16841
Spliceosome [BR:mgr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MGG_16841
 Complex C
  U2 snRNP components
    MGG_16841
SSDB
Motif
Pfam: LSM YopQ
Other DBs
NCBI-GeneID: 12985068
NCBI-ProteinID: XP_003712525
UniProt: G4N3U5
LinkDB
Position
3:complement(4330165..4331212)
AA seq 95 aa
MADSGEAQANEPFGLVRLLLDEVVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETHYIQD
EDDESELKTVSRKLEMLFVRGDSVVMISPSDQVAA
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcggacagcggtgaggctcaagccaatgagccttttggcttggtgaggcttctgttg
gacgaggttgtgtttgtcaagcttcgaggagacagagagctcaagggccgtttgcatgca
tacgattctcattgcaacttggtcctcggtgatgtcgaagaaacacattacattcaggac
gaggacgatgagtcggaactgaagactgtgtcacgaaagcttgagatgttattcgtgaga
ggagacagtgttgtcatgatatcaccatcagaccaggtagcagcatga

DBGET integrated database retrieval system