Mannheimia granulomatis: A4G16_00815
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Entry
A4G16_00815 CDS
T06759
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03030
DNA replication
mgra03410
Base excision repair
mgra03420
Nucleotide excision repair
mgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4G16_00815 (ligA)
03410 Base excision repair
A4G16_00815 (ligA)
03420 Nucleotide excision repair
A4G16_00815 (ligA)
03430 Mismatch repair
A4G16_00815 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgra03032
]
A4G16_00815 (ligA)
03400 DNA repair and recombination proteins [BR:
mgra03400
]
A4G16_00815 (ligA)
Enzymes [BR:
mgra01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A4G16_00815 (ligA)
DNA replication proteins [BR:
mgra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4G16_00815 (ligA)
DNA repair and recombination proteins [BR:
mgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A4G16_00815 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4G16_00815 (ligA)
MMR (mismatch excision repair)
DNA ligase
A4G16_00815 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A4G16_00815 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
HHH_3
5_3_exonuc
GAS
Motif
Other DBs
NCBI-ProteinID:
QIM66016
UniProt:
A0A6G8JG12
LinkDB
All DBs
Position
complement(171304..173364)
Genome browser
AA seq
686 aa
AA seq
DB search
MSLSNQTAFSFEENATTELSEQVEQLRQKLRQYEYEYHVLDNPTVPDAEYDRLMNELKNL
EWQHPELITSDSPTQRVGAKPLSGFAQITHEIPMLSLDNAFASEELDGFLRRMESYISEN
PGNLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEDITANIRTIRNIPLKLNLQNP
PARLEVRGEIFMPQAGFNTLNEKALAKGEKTFANPRNAAAGSLRQLDPKITSQRPLVLNA
YSIGVYESDDELPSTHYDRLQWLKSIGLPVNSEIRLAKGKGELLNYYADIQAKRPQLGYD
IDGTVLKVNDIALQEQLGFISRSPRWAIAYKFPAQEEMTILKDVEFQVGRTGAITPVAKL
EPVFVAGVTVSNATLHNGDEIERLGIVIGDTVIIRRAGDVIPQIIGVVAERRPENAEKIE
FPTACPICHSAVVRVEGEAVARCTGGLFCGAQRKEALKHFVSRKAMDIDGVGEKLIEQLM
TRELIHTPADLFKLDHTTLMRLERMGEKSAQNALNSIEKAKNTTLPRFLFSLGIREVGEA
TALNLANHFGNLEAIRQATFEQLKEVQDVGEVVANRIVSFWQEPHNVDVVEDLIAQGVHW
QDVVKTEIADNPLKDKNVVLTGTLTQLTRDEAKALLQSLGCKVSGSVSGKTDYLIAGEKA
GSKLTKAQELGIQILSEQEFIELTTH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatccaatcaaacagccttctcttttgaagaaaacgccactacggaattatca
gagcaagttgaacaacttcgccaaaaactgcgtcaatatgagtacgaatatcacgtctta
gataacccaaccgtgccggatgcagaatacgaccgtttaatgaatgagctgaaaaatctc
gaatggcagcaccccgagcttatcacctcagattccccaactcagagagtaggtgcaaaa
ccgctatcgggctttgctcaaatcacacatgaaatcccgatgttatcgttagataatgct
tttgcgagtgaagaattagatggctttttacgccgtatggaaagctatattagcgagaac
ccgggtaacttggagttttgctgtgaacccaagcttgatggcttagcagtgagcatttta
tatgaaaacggcattctcacccgagccgcaacccgtggagacggcaccacaggtgaggat
atcacagcgaatatccgtactattcgaaatattccgttaaagcttaatctacaaaatccg
cctgctcgtttggaggtacgtggcgaaatttttatgccgcaagcaggcttcaatacctta
aatgaaaaggcacttgctaaaggcgaaaaaacttttgctaacccacgcaatgcggctgca
ggttcgttacgtcaattagatccgaaaatcaccagccagcgacctttggtgctaaatgct
tatagtatcggcgtttatgaaagtgatgatgagctaccctctactcattacgatcgccta
caatggctaaaatccatcggtttaccggtaaattcggaaattcgtttagcaaaaggtaaa
ggcgaattattgaattattacgccgatattcaagcaaaacgcccacaactcggctatgat
attgacggtaccgtgttaaaagtaaacgatattgccttgcaagaacaacttggttttatt
tctcgctcaccacgttgggcaattgcttacaaattcccggcacaagaagagatgacaatt
ctaaaagatgtcgaatttcaggttggtagaacaggggcgattacccctgtcgccaaatta
gagccggtgtttgtagcaggtgtgaccgtcagtaacgctactttgcataatggcgatgaa
attgaacgcctaggcattgtcattggtgataccgtaattattcgccgtgccggcgatgtg
atcccacaaattatcggcgtggtggcagaacgtcgtccggaaaatgcagaaaaaatcgaa
tttccgaccgcttgtcctatttgtcattcagctgttgtgcgtgtggaaggcgaagctgtc
gcccgctgtactggcggattattctgcggggctcaacgtaaagaggccttaaagcatttc
gtttcccgcaaagcgatggatattgacggagtgggagaaaaactgattgaacaattaatg
acgcgtgagttaatccacactcccgcagacctctttaagcttgaccacaccaccttaatg
cggttagagcgaatgggcgagaaatctgctcaaaatgcgttaaacagcattgaaaaagcg
aaaaacaccactcttcctcgcttcttgttctctttagggattcgtgaagttggtgaggca
accgcattaaatttagccaaccatttcggcaatttagaggctatccgccaagcgactttc
gaacaactaaaagaagtgcaagatgtgggcgaagtggtcgcaaaccgtattgtcagcttt
tggcaagaaccgcataatgtggatgtggttgaagatttgatcgctcaaggtgtacattgg
caagatgtagtgaaaacggaaattgccgataacccactgaaagataaaaatgtcgttttg
acaggcacgcttacccaattaacccgtgatgaagccaaagcgttattgcaaagtctgggc
tgcaaggtttccggctcggtttctggtaaaaccgattatttaattgcgggtgaaaaagca
ggttcaaaactcactaaagcccaagaattaggcattcaaattttaagtgagcaagagttt
attgaactcacaactcattaa
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