Magnetospirillum gryphiswaldense MSR-1: MSR1_27390
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Entry
MSR1_27390 CDS
T05662
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00020
Citrate cycle (TCA cycle)
mgry00270
Cysteine and methionine metabolism
mgry00620
Pyruvate metabolism
mgry00630
Glyoxylate and dicarboxylate metabolism
mgry00680
Methane metabolism
mgry00710
Carbon fixation by Calvin cycle
mgry00720
Other carbon fixation pathways
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry01120
Microbial metabolism in diverse environments
mgry01200
Carbon metabolism
Module
mgry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mgry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mgry_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MSR1_27390 (mdh)
00620 Pyruvate metabolism
MSR1_27390 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
MSR1_27390 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSR1_27390 (mdh)
00720 Other carbon fixation pathways
MSR1_27390 (mdh)
00680 Methane metabolism
MSR1_27390 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MSR1_27390 (mdh)
Enzymes [BR:
mgry01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
MSR1_27390 (mdh)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AVM75209
UniProt:
V6F8I4
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All DBs
Position
complement(2915103..2916059)
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AA seq
318 aa
AA seq
DB search
MARKKIALVGSGNIGGTLAHLIGLKELGDVVMFDIAEGIPQGKGLDIAESTPVEGVNARY
SGANDYSAIKDSDVVIVTAGVPRKPGMSRDDLIGINTKVMVSVGQGIKENCPNAFVIVIT
NPLDVMVWVLQQASGLPANKVVGMAGVLDSARFRHFLAEEFNVSPEDVTAFVLGGHGDTM
VPLTRYSTVAGIPLPDLVKMGWTTQEKLDQIVQRTRDGGAEIVGLLKTGSAFYAPAASGI
AMAEAYLKDKKRVMPVAALVKAGQFGQKDDIYVGVPVVIGEGGVERLVEIELSAEEQAAF
DKSADAVRSLVAVAKGLL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagaagatcgctctcgttggctccggtaacattggcggcacgctcgcccac
ctcatcggcctgaaggagctgggcgatgtggtgatgttcgacatcgccgagggcattccc
cagggcaagggcctggacatcgccgaatcgactccggtcgagggcgtcaatgcccgttac
tccggcgccaatgactattccgccatcaaggactccgatgtggtgatcgtcaccgccggc
gttccgcgcaagcccggcatgagccgcgatgacctgatcggcatcaacaccaaggtcatg
gtgtcggtcggccagggcatcaaggaaaattgccccaacgccttcgtcatcgtcatcacc
aacccgctggacgtgatggtgtgggtgctgcagcaggcttccggcctgccggccaacaag
gtcgtcggcatggccggcgtgctcgactcggcccgcttccgtcacttcctggctgaagaa
ttcaacgtttcgccggaagacgtcaccgctttcgtcttgggcggtcacggcgacaccatg
gtgcccttgacccgttactccaccgtcgccggcattccgctgccggatctggtgaagatg
ggctggaccacccaggagaagctggaccagatcgtgcagcgcacccgtgacggcggcgcc
gagatcgtcggcctgctgaagaccggttcggccttctacgccccggctgcctcgggcatc
gccatggccgaagcctatctgaaggacaagaagcgggtcatgcccgtcgccgccctggtc
aaggccggccagttcggtcagaaggacgacatctacgtgggcgttccggtggtcatcggt
gaaggtggcgtcgagcgtctggtcgagatcgagctgtcggctgaagagcaggccgctttc
gacaagtccgccgacgccgtccgcagcctggtggccgtggccaagggtctgctgtaa
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