Magnetospirillum gryphiswaldense MSR-1: MSR1_31790
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Entry
MSR1_31790 CDS
T05662
Symbol
gdhB_1
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00220
Arginine biosynthesis
mgry00250
Alanine, aspartate and glutamate metabolism
mgry00430
Taurine and hypotaurine metabolism
mgry00910
Nitrogen metabolism
mgry01100
Metabolic pathways
mgry01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
MSR1_31790 (gdhB_1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSR1_31790 (gdhB_1)
00220 Arginine biosynthesis
MSR1_31790 (gdhB_1)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
MSR1_31790 (gdhB_1)
Enzymes [BR:
mgry01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
MSR1_31790 (gdhB_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_HM1
GDH_ACT3
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
AVM75645
LinkDB
All DBs
Position
complement(3356601..3361364)
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AA seq
1587 aa
AA seq
DB search
MNHSSDYLRSTLADDIAAIIDKHLEGERAIHSRTLAQALLAGLPAADLEELDGHQFFAIT
IGLLGFMQKRPPGTAAIRMYNPDLESHGWTSSHSVIEIVNDDMPFLLDSIAMRLAANTIG
IHQLIHPILLIGRDDSGQLTGLGDGRAESIMHIQVDRQDAARHAEICRQLTAILAEVRTA
VADWRDMRDHIKTVATGLPAHAGTAPAEDVAEDVAFLDWLHDNHFTFLGYRHFVLSGPEQ
APVVAEDGESLGILRDGTVMVFDDSIALAAMPDEIRAFLNASGLLLVTKSVNQSRVHRPA
HMDVIGVKYCDDQGRVIALHAFVGLFTSAAYTRNPAAIPLLRQKVNRVEARAGFPRHSHD
AKALTNILETYPRDELFQISEDLLYRIALGILRIQDRPRVALFVRHDDFSRFVSCLVYLP
RDRYDTPMRLAVTRILETAYDGSLDAYYTQVSDGPLARLHLLVRTRAGAAPPVDVGDLEN
RIAIATRSWADHLQDVLIHDMGEGRGLALARRWRDGFPAAYREHHMPPAALGDVERLERI
AADEDICLNLYRPVEAPAHEARLKLLRRGETVALSDILPILEAMGLRVIAEVPHEIRAGD
LKQSFWLHDFQVQSANGAAIALDQRADLFEAALAAIWRGNAESDGFNRLVLAAALPWREV
VILRAYAKYLRQAGSTLSQSYVERALFDNPAQSAALVAWFKALFDPDHRCGDACLVESQT
KALLDQVANADDDRILRRFFNLIGATLRTNWFQGRDYMSFKLDSTAIDDLPLPRPKVEIF
VYSPRVEAVHLRGGKVARGGIRWSDRRDDFRTEILGLMKAQMVKNAVIVPVGAKGGFVVK
RPPTEGGREALRAEGIVCYQTMMRGLLDLTDNLQGGEVVPPTGIVRRDGNDPYLVVAADK
GTATFSDIANALSLEYGFWLGDAFASGGSKGYDHKVMGITARGAWEAVKRHFREIGIDTQ
TTPFTTIGVGDMSGDVFGNAMLCSPHTRLIAAFNHSHIFIDPHPDSRAHGERQRLFTAIK
AWGDYDPALISQGGGVFARSAKTITISTEMAARFGIAKPSLTPTELIRVLLATPVDLLFF
GGIGTYIKAHDESHAEVGDRANDAIRIDGRAICAKVVGEGANLGVTQRGRVEMAQNGIRL
NTDAIDNSAGVDTSDHEVNIKILLNEVVDSGDLTPKQRDQLLASMTDEVAALVLRDNYLQ
TQALSVMEAGGVESLDGQARFMRLLEKAGRLDRAIEYLPTDDILVERAAHRRGLTRPELS
VLLAYAKIWLHDAVMASDLPGDAFMARDLARYFPTALQQRFAGQIGQHRLRREIVATAVT
NSMINRVGVGFVLDMMDRTGFGPADIARAYIVARDAYGLRSLWQEIEALDGAIPASLQIV
MLTEANRLLERTTGWVLRNIPAPFDIGAAIGSLEPGITALETAGPAILPADLAEAVAARS
QDYTTQGAPEALANRVGGMIVLASAADIVRLAQQHDQPVGRVGQVYFQAGNRFGLGWLRA
QAQRLVSGGHWQKLAVNAATEDLHAHQRAITHSVLNRAQTLEEWSQAHDAEIARADSLLA
ELRAAPQLDLSMLVVANRQLKTLADGG
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacagttctgattatttgcgctcgaccttggccgacgatatcgccgccattatc
gacaaacatcttgaaggcgaacgcgccatccacagtcggaccctggcccaggctttgctg
gccggcctgcccgccgccgatctggaggagttggacggccaccagttcttcgccatcacc
atcggtcttttgggcttcatgcagaagcgcccccccggcaccgccgccatccgcatgtat
aatcccgacttggaaagccacggctggacctcgtcccactcggtcatcgagatcgtcaat
gacgacatgccgtttctgctcgattccatcgccatgcggctggcggcgaacactatcggc
atccaccagttgatccacccgatcctgttgatcggtcgtgatgacagcggccagttgacc
ggcctgggcgatggtcgcgccgaatcgatcatgcatatccaagtggaccgccaagatgcc
gcgcggcatgctgaaatctgccggcaactgaccgcaatcctggccgaagtgcgcaccgct
gtcgccgattggcgcgacatgcgcgaccacatcaagaccgtggccaccggcctgcccgcc
catgccggcaccgcacccgccgaggacgtggccgaagatgtcgcctttctcgactggctg
catgacaaccatttcaccttcttgggctatcgccatttcgtcctgtcgggaccggaacag
gcgccggtggtggctgaggacggcgaaagcctgggcatcctgcgcgacgggaccgtgatg
gtgttcgacgattccatcgccctggccgccatgcccgatgagatccgcgccttcctcaat
gcgtcggggctgttgctggtgaccaaatcggtgaaccaatcccgcgtccaccgcccggcc
cacatggacgtcatcggcgtcaaatattgcgacgatcaaggccgtgtgatcgccctgcac
gcctttgtcggcctgttcacctcggccgcctatacccgcaatccggcagccatcccgctt
ttgcggcaaaaggtcaaccgggtcgaagcccgcgccggcttcccccgccacagccacgat
gccaaggcactgaccaatatcctggaaacctatccgcgcgacgaattgttccagatttcc
gaagatctgctgtaccgcatcgccttgggcattctgcgcatccaggatcgcccgcgcgtc
gccctgttcgtccgccacgacgacttttcccgcttcgtctcgtgcctggtctatctgccg
cgcgaccgttacgacacccccatgcgtctggccgtcacccgcatcctcgaaactgcctat
gacggcagcctggatgcctattacacccaggtttccgacggaccgctggcccggctgcac
ctactggtgcggacccgggcgggggccgcgccccctgtggatgtgggcgacttggaaaat
cgtatcgccatcgccacccgctcgtgggccgaccatctccaggacgtcttgatccacgat
atgggcgaagggcgcggccttgccctggcccggcgctggcgcgacggctttcccgccgcc
tatcgtgaacaccacatgccgccagccgccctcggcgacgtcgagcggctggaacgcatc
gccgccgatgaagacatctgtctcaacctgtatcgaccggtggaggctcccgcgcacgag
gcgcggctgaagctgctgcgccggggcgaaaccgtggcattgtccgacatcctgcccatc
ctggaagccatggggcttcgggtcatcgccgaagtcccccatgaaatccgtgccggcgac
ctgaagcaatcgttctggctgcatgatttccaggtgcaatcggccaatggcgccgccatc
gccctggaccagcgggccgatctgttcgaggccgccttggccgccatctggcgcggtaat
gccgaaagcgacggcttcaaccggctggtgctggccgctgccctgccctggcgcgaggtg
gtgatcctgcgcgcctacgccaaatatctgcgccaagccggatcaaccctgtcgcaaagc
tatgtggagcgggctttgttcgacaatccggcccagtcggcggccctggtcgcctggttc
aaggccttgttcgaccccgatcaccggtgcggcgacgcctgtttggtcgaaagccagacc
aaggccttgctcgatcaggtggccaatgccgacgacgaccgcatcttgcgccgcttcttc
aacctgatcggcgccaccttgcgcaccaactggttccagggccgcgactacatgtcgttc
aagctggattccactgccatcgacgatttgccgctgccccggcccaaggtggaaatcttc
gtctattcgccgcgggttgaggctgtgcatttgcgtggcggcaaggtggcccgcggcggt
atccgctggtccgaccgccgcgacgatttccgcaccgagattctgggtctgatgaaggca
cagatggtcaagaacgccgtcatcgttccagtgggggccaagggcggttttgtcgtcaaa
cgcccgccgacggaaggcgggcgcgaggctctgcgggccgaaggcatcgtctgttaccag
accatgatgcgcggcctgctcgacctgaccgacaacctgcaaggcggcgaggtggtgcca
ccgacgggcatcgtccggcgcgacggcaacgatccctatctggtggtggccgccgacaag
ggcaccgccacattctcggatatcgccaatgcgctatccctggaatacggcttctggttg
ggcgacgccttcgcctcgggcgggtccaagggctatgaccacaaggtcatgggcatcacc
gcgcgcggcgcctgggaggcggtgaaacgccatttccgcgaaatcggcatcgacacccag
accacccccttcaccaccatcggcgtcggcgacatgtccggcgacgtcttcggcaatgcc
atgctgtgctcgccccatacccggctgatcgccgctttcaaccattcccacatcttcatc
gacccgcatcccgattcccgcgcccatggcgagcgccagcgcctgttcacggcgatcaag
gcctggggcgattacgaccccgctttgatctcacaaggcggcggcgtgttcgcccgatcg
gccaaaaccatcaccatcagtaccgaaatggcggcccgcttcggcatcgccaagcccagt
ctgacaccgacggaactgatccgcgtcttgttggccaccccggtcgatctactgttcttc
ggcggcatcggcacctatatcaaggctcatgacgaaagccacgccgaggtcggcgaccgc
gccaacgatgccatccgcatcgatggccgcgccatctgtgccaaggtggtgggtgagggc
gccaatctgggggtgacccaacgcggacgggtggaaatggcccaaaacggcatccgcctc
aacaccgacgccatcgacaattccgccggcgtcgacacctcggaccacgaggtcaacatc
aagatcctgctgaacgaggtggtggacagcggcgacctgacgccaaagcagcgcgaccag
ttgctcgcctccatgaccgacgaagtggcggcgctggtgttgcgggataattatctgcaa
acccaagccctgtcggtgatggaagccggcggcgtcgaatcgctggacggccaggcccgt
ttcatgcgcctgctggaaaaggccggtcgcctggaccgcgccatcgagtacctgcccacc
gatgatattctggtggaacgcgccgcccaccgccgcggtctgacccgtccggaactgtcg
gttctgctggcttacgccaagatctggctgcacgacgcggtgatggcatccgatctgccg
ggcgatgccttcatggcccgcgacttggcccgctatttccccaccgccttgcagcaacgt
ttcgccggacagatcggccagcaccggctgcggcgcgaaatcgtcgccaccgccgtgacc
aattccatgatcaaccgggtgggcgtgggcttcgtcctcgacatgatggaccgcaccggc
ttcggcccggccgacatcgcccgggcgtatatcgtcgcccgcgacgcctatggcctgcgc
agcttgtggcaggagatcgaggccctggacggcgccattccggccagtttgcaaatcgtc
atgctgaccgaggccaaccggctgctggagcggaccaccggttgggtgctgcgcaacatt
cccgcgcccttcgacatcggtgctgccatcgggtcactggaaccgggcatcaccgccctg
gaaaccgccggccccgccatcctgcccgccgatctggccgaagcggtggcggcacgcagc
caggactacaccacccaaggcgcgccagaagccctggccaatcgtgtcggcggcatgatc
gtgctggcttccgccgccgatatcgtgcgcttggcgcaacagcacgaccaaccggtgggt
cgggtcggacaggtgtattttcaggcgggtaaccgcttcggcctgggctggctgcgcgcc
caggcccagcgtctggtcagcggcggccattggcagaaactggcggtcaacgccgccacc
gaggacctgcacgcccaccaacgggccatcacccattctgtcctgaacagggcgcaaacc
ctggaggaatggagccaagcccacgatgccgagatcgcccgcgccgattcgctgctggcc
gaactgcgcgccgcgccgcaattggacctgtccatgctggtggtagccaatcggcaactg
aagactttggccgatggcggttga
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