Magnetospirillum gryphiswaldense MSR-1: MSR1_36960
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Entry
MSR1_36960 CDS
T05662
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00270
Cysteine and methionine metabolism
mgry00450
Selenocompound metabolism
mgry00670
One carbon pool by folate
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry01230
Biosynthesis of amino acids
mgry04980
Cobalamin transport and metabolism
mgry04981
Folate transport and metabolism
Module
mgry_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MSR1_36960 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MSR1_36960 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MSR1_36960 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MSR1_36960 (metH)
04980 Cobalamin transport and metabolism
MSR1_36960 (metH)
Enzymes [BR:
mgry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
MSR1_36960 (metH)
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
CdhD
RibD_C
Motif
Other DBs
NCBI-ProteinID:
AVM76155
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All DBs
Position
complement(3880475..3883951)
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AA seq
1158 aa
AA seq
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MTNILDHLHQRVLLCDGGTGALVQAMNLSVDKDFMGLENCTDILVESRPDVVRNIAMQYF
NAGADMVETNTFGASPITLAEFGIADKAFDLNKRAAEIAREAAEEFSDGRARFVLGSVGP
GTKLPSLGHIGYDELEAAYVVQCAGQIAGGADAILIETCQDPLQIKAAVNGAKIAREQAG
KDTPIFVQVTVETTGTMLVGADIAAAATVVHSLGVPSLGLNCAAGPQEMLEHVKYLVENW
PDLISLQPNAGLPELVDGQTRYPLLPEELAVWHERFVGMGVNLLGGCCGTTPAHIGATHQ
MLQRIGSGYRPNPVKRSVHWVPAVASLYSQVTLRQENAFLAIGERCNANGSKKFRDLQDA
EDWDGIVAMAREQVKEGSHTLDVCTAFVGRKEVADMTQVVTRLRGAVTTPLVIDSTELPV
LEAALKLYGGKAILNSINFENGEEDAADRLKLAKKFGAAVVALTIDEEGMAKDCAAKLRI
AHRLYDFAVNQHGLPAGDLLFDPLTFTICTGNEDDRKLGLETLDAIEALARELPECGIVL
GLSNISFGLKPAARQVLNSVFNDYAVKRGMTGAIVHVSKILPLHSIPADEVKAAEDLIFD
RRSPGIDPLQAFIALFGDRKAAENKKELPAKIEDRLKQRIVDGDRTGLDDDLAAAMAEGW
APLAIINDLLLDGMKVVGELFGSGKMQLPFVLQSAETMKAAVAYLEPHMEKSDGSAKATM
VLATVKGDVHDIGKNLVDIILTNNGYKVVNIGIKQPVGEIIKAAKEHKADAVGMSGLLVK
STVIMKDNLEEMRAQGLDVPVLLGGAALTRKFVEEDCLNAYGGSGVAYARDAFDGLDLMA
KVADGSFDTYVQARSKAPKSGNSKRIGQPAEASTLRPVDWDEVTMRRAELHRDVPPPVPP
FWGAKLIENVPLQNLAGFLNETMLYQFHWGYRKQGKSIDEFKAWASKELKPIALNMLKRC
SQEGILHAQGVYGYWKAAADGDSVVVFDTDGSTELARFGFPRQARDGGLCIADFFRPISD
PVRDVIGLQVVTMGQKASDVARQWFEANKYQDYLYLHGLSVEMAEAMAEYVHKRIRAELG
FAAQDAAEMDKLLKQNYQGSRYSFGYPACPNVEDQKQLLALLGADRVGITLSDEFQLEPE
QSTSAIVCVHPQAKYFTV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatattctcgaccatctccaccagcgtgttcttttgtgcgacggcgggaccggc
gccctggtccaggccatgaacctgtcggtggacaaggatttcatgggcctggaaaactgc
accgacatcctggtggaatcgcgccccgacgtggtgcgcaacatcgccatgcagtatttc
aacgccggcgccgacatggtcgagaccaacactttcggcgccagcccgatcaccttggcc
gagttcggcatcgccgacaaagccttcgacctcaacaagcgcgcggctgaaatcgcccgc
gaggcggcggaagaattcagcgatggccgcgcccgtttcgtcctgggctcggtcggcccg
ggcaccaagctgcccagcttgggccatatcggctatgacgaactggaagcggcctatgtg
gtgcaatgcgccggccagatcgccggcggcgccgacgccatcctgatcgagacctgccag
gacccgttgcagatcaaggccgccgtcaacggcgccaagatcgcccgcgagcaagcgggc
aaagatactcccatcttcgtccaggtgacggtggaaaccaccggcaccatgctggtcggc
gccgacatcgccgccgccgctaccgtggtgcattccctgggcgtgccgtccctgggcctc
aactgcgccgccggcccgcaggagatgctggaacacgtcaagtatctggtggaaaactgg
cccgacctgatttcgttgcagcccaatgccggcctgcccgaactggtcgatggccagacc
cgctatcctttgttgccggaagaactggcggtgtggcacgaacgtttcgtcggtatgggc
gtcaacctgctgggcggctgctgcggcaccacgccggcccatatcggtgccacccatcag
atgttgcagcggatcggctccggctatcgccccaatccggtcaagcgtagcgtccattgg
gtgccggcggtggcatcgttgtattcccaggtgacattgcgccaggaaaacgcctttctc
gccatcggcgagcgttgcaacgccaacggctcgaagaagttccgcgatttgcaggatgcc
gaggattgggacggcatcgtcgccatggcgcgcgagcaggtcaaggaaggcagccacacc
cttgacgtctgcaccgccttcgtcggacgcaaggaagtggccgacatgacccaggtggtg
acccgcctgcgcggcgcggtgaccacgcccctggtcatcgattccaccgaactgccggtg
ctggaagcggcactcaagctttatggcggcaaggccatcttgaactccatcaatttcgag
aacggcgaggaagacgccgccgaccgcctgaagctggccaagaaattcggcgcggcggtg
gtggcgctgaccatcgacgaagagggcatggccaaggattgcgccgccaaattgcgcatc
gcccatcgcctctatgatttcgccgtcaaccagcatggcttgccggcgggcgatctgttg
ttcgacccgctcaccttcaccatctgcaccggcaacgaggacgatcgcaagctcggcctg
gaaaccctggacgccatcgaggccttggcccgtgaattgccggaatgcggcatcgtcctg
gggctgtccaacatttccttcggtctgaagccggcggcgcggcaggtgctgaactcggtg
ttcaacgattatgccgtcaagcgcggcatgaccggggccatcgtccacgtctcgaagatc
ctgcccctgcactccatcccggcggacgaagtcaaggcggccgaggatctgatcttcgac
cgccgcagccccggcatcgacccgttgcaggccttcatcgccctgttcggcgaccgcaag
gcggcggaaaacaagaaggagctaccggctaagatcgaggaccgcctgaagcagcgcatc
gtcgacggcgaccgcaccggcctggacgacgatctggccgccgccatggccgagggctgg
gcgcccttggccatcatcaacgacctgctgctcgacggcatgaaggtggtgggcgagttg
ttcgggtccggcaagatgcaactgcccttcgtgctgcaatcggcggaaaccatgaaggcg
gcggtggcctatctggagccgcacatggaaaaatccgacggttcggccaaggcgaccatg
gtgctggccaccgtcaagggcgacgtccacgacatcggcaagaatctggtggacatcatc
ctcaccaataacggctacaaggtggtcaatatcggcatcaagcagccggtgggcgagatc
atcaaggcggcgaaggaacacaaggccgatgccgtcggcatgtccggcctgttggtcaaa
tccaccgtgatcatgaaggacaacctggaagaaatgcgggcccagggcctggacgtgccg
gtgctgctgggcggcgcggcgctgacccgcaaattcgtcgaggaagattgtctgaacgcc
tatggcggttccggcgtcgcctatgcccgcgatgccttcgacggcctggatttgatggcc
aaggtggccgacggctcgttcgacacttatgtacaggcgcgcagcaaggcgccgaaatcg
ggcaattccaagcgtatcggccagccggccgaggccagcacgctgcgtcccgtcgattgg
gacgaggtgaccatgcgccgggccgagttgcaccgggacgtgccgccgccggtgccgccg
ttctggggggccaagctgatcgagaacgtccccttgcagaatctggccggcttcctcaac
gaaaccatgctctatcagttccattggggctatcggaagcagggcaagagcatcgacgag
ttcaaggcctgggcgagcaaggaactgaagcccatcgccctcaacatgctcaagcgctgt
tcccaggaaggcatcctgcacgcccagggcgtctacggctattggaaggccgccgccgat
ggtgattcggtggtggtgttcgacaccgacggcagcaccgagttggcccgcttcggcttc
ccccgtcaggcccgcgacggcggcttgtgcatcgccgatttcttccgtcccatcagcgac
ccggtgcgtgacgtcatcggtttgcaggtggtgaccatggggcaaaaggcgtcggacgtg
gcgcggcaatggttcgaggccaacaagtaccaggattacctgtacctgcacggcctgtcg
gtggagatggccgaggccatggccgaatacgtccacaagcgcatccgcgctgagttgggc
ttcgcggcccaagacgccgccgaaatggacaagctgttgaagcagaactaccagggctcg
cgctacagcttcggctatcccgcctgccccaacgtcgaggaccagaagcaattactggcg
ctgttgggcgccgaccgcgtcggcatcaccctgtccgacgaattccagttggagccggaa
caaagcaccagcgccatcgtctgcgtccatccgcaggccaagtacttcaccgtttga
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