Mycoplasmoides genitalium M2288: CM5_01470
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Entry
CM5_01470 CDS
T02208
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mgu
Mycoplasmoides genitalium M2288
Pathway
mgu03030
DNA replication
mgu03410
Base excision repair
mgu03420
Nucleotide excision repair
mgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CM5_01470
03410 Base excision repair
CM5_01470
03420 Nucleotide excision repair
CM5_01470
03430 Mismatch repair
CM5_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgu03032
]
CM5_01470
03400 DNA repair and recombination proteins [BR:
mgu03400
]
CM5_01470
Enzymes [BR:
mgu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CM5_01470
DNA replication proteins [BR:
mgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CM5_01470
DNA repair and recombination proteins [BR:
mgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CM5_01470
NER (nucleotide excision repair)
GGR (global genome repair) factors
CM5_01470
MMR (mismatch excision repair)
DNA ligase
CM5_01470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CM5_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
Nlig-Ia
Lig_C
DUF678
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AFQ04577
LinkDB
All DBs
Position
complement(302564..304540)
Genome browser
AA seq
658 aa
AA seq
DB search
MDVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQR
VGGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNINFQTNSKNEFVVEPKIDGVSISL
TYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIPFTKTIEIRGEIFVDKKTFLAINN
QLEKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESITTQTMVLEQLKQWKF
PVSDTIRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSPRWAI
AFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHNFDYIKTKDIRI
NDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIVDEVDQYCTNETC
KERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDKKNQVLKLDLKIG
DKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKALQHASLENLISL
NDVGITVAESLYNWFHDPNHLQLIEQLELRQVKTDQLPLKINFETNSIYFQKRFLITGSF
NISRDQIKDLLSAKFDCQFASEVKPTVDFVIAGNKPTLRKINHAKELNIPIINEAIWT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaattgaagattcaacagctggttaacttaataaaaaactatgactatcac
tactatgttttaagcgaacctttaattgatgattttgagtatgatatgttgtataagtca
ctccaacaattagaaaaagatcatcctgatttaatccaaattgattcccctacccaaagg
gtgggaggagaagctgtgaagggttttaaaaagttaaaccataacagtccaatgctctct
ttggaaaatgctttttcaactaaagaaattgctaattttattgataatattaactttcaa
acaaactcaaaaaatgaatttgtagttgaacctaaaattgatggagttagtatctctcta
acttataaaaatggtgttttagttcatgctttaaccagaggagatggaagtgttggggaa
gatgttttaaataatgttaaaaccattaaatctatccctttaacaatccctttcacaaaa
acaattgagattaggggtgagatttttgttgataaaaaaacttttttagcaattaacaat
caacttgaaaaaccatttgctaatgcaaggaatctagcagcaggtacaatacgtaattta
aacagtgaaatcactgcacagcgcaaattaagggcattattttattacatccctaatggt
ttggaagagtcaatcactactcaaactatggttttagaacagcttaagcagtgaaaattc
ccagttagtgataccatcagggtttttcaaaataaatttcaattaattaattacttggaa
gcgtttgacaaaaaacgagaacagttaacttttaatcttgatggtttagttattaaacta
aacagcttgcttttttatcaacaattaggtgctacaagtaaatcaccacgttgggcaata
gcatttaaatttagtcctaaatttgttcaaactaaattaacagcagttcttataacgatt
ggtagaactggtagagtgaactatactgctaaattagaaagtgttaatttagatggaaca
aaagtaacagctgctactttacataactttgattacattaaaactaaagacattaggatc
aatgacactgttgttatctataaagctggggaaattatccctaaagtactaaaggtaaac
cttgaaaaaagaaaaaatgacactatcataattcaagagcaaaaatattgtccttcatgt
aattcaaaactagtcaaaatagttgatgaagttgatcagtattgtaccaatgaaacttgt
aaggagcgaaacatccagttaattaactattttgtttctaaaactgctatggacattaac
gggttgaatattaatactattaccaaactttatgaacacaatttggttagatctatagtt
gatctttatgatttaaaagacaagaaaaaccaagttttaaaattagatctgaagattggt
gataaacttttcaacaagttagttgataacattgaaaattcaaaacaaaaaggaatggct
agattactaacaggacttggtattaagcatgttggtaatgtattagctaagaatttagct
aatcattttaaaaatatcaaagcattacagcatgctagcttagagaacttaattagttta
aatgatgtaggaataacagtagctgaatcattgtataactggtttcatgaccctaaccat
ttgcagttaattgaacaacttgaattaagacaagtaaaaacagatcaattaccactgaaa
attaactttgaaactaacagtatttattttcaaaaacgctttcttattaccggtagcttt
aacattagtcgtgaccaaattaaggatttattatcagctaagtttgattgccagtttgca
agtgaagtcaaaccaacagttgactttgttattgcaggaaacaaaccaactttaagaaaa
atcaatcacgccaaagaactgaacattcctatcattaatgaagcaatttgaacatag
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