Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3257
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Entry
MGMSRv2__3257 CDS
T02960
Name
(GenBank) putative citrate lyase subunit beta
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00630
Glyoxylate and dicarboxylate metabolism
mgy00660
C5-Branched dibasic acid metabolism
mgy00680
Methane metabolism
mgy00720
Other carbon fixation pathways
mgy01100
Metabolic pathways
mgy01120
Microbial metabolism in diverse environments
mgy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MGMSRv2__3257
00660 C5-Branched dibasic acid metabolism
MGMSRv2__3257
09102 Energy metabolism
00720 Other carbon fixation pathways
MGMSRv2__3257
00680 Methane metabolism
MGMSRv2__3257
Enzymes [BR:
mgy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
MGMSRv2__3257
4.1.3.25 (S)-citramalyl-CoA lyase
MGMSRv2__3257
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
CDL00472
UniProt:
V6F521
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All DBs
Position
3339327..3340376
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AA seq
349 aa
AA seq
DB search
MSIKPPRKFFEPLAIGAPAPYRELPVRLERMIHFFPPHVEKMRAKAGDMAKNVDVLLGNL
EDAIPADAKEAARAGFVEVARAWDPACGTGLWTRVNCLNSPWFLDDVTTLVAEAGNKLDV
IMLPKVEGPWDIHYLDQLLAQLEAKHGVSKPIMIHAILETALGVENVAAIAQASPRMHGM
SLGPADLAASRGMKTTRVGGGHPFYGVLEDAKNDAPRTLFQQDLWHYTVAKMVDACQSAG
IKAFYGPFGDFSDSPACEAQFRNAFLLGCAGAWSLHPNQIDIAKKVFSPDVGEVLFAKKI
LDAMPDGTGAVMIDGKMQDDATWKQAKVIVDLARVVAAKDPVMAAQYGL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaagccgcccaggaagttcttcgagccgttggccatcggcgcccctgcgccc
tatcgcgaattgccggtgcggctggaacgcatgatccatttcttcccgccgcatgtggaa
aagatgcgggccaaggcgggggacatggccaagaacgtcgacgttctgctcggcaatctg
gaagatgccatccccgccgatgccaaggaagcggcgcgcgccggtttcgtcgaggtggcc
cgcgcctgggacccggcttgcggcaccggcctgtggacccgcgtcaattgcctgaactcg
ccctggttcctcgacgacgtcaccaccttggtggccgaggccggcaacaagctggatgtg
atcatgctgcccaaggtggaaggcccgtgggacatccattacctggatcagctgctggcc
cagttggaagccaagcatggcgtcagcaagccgatcatgatccatgccatcctggaaacg
gcgctgggggtggaaaacgtcgccgccatcgcccaagccagcccccgcatgcacggcatg
agcctgggtccggccgatctggcggccagccgcggcatgaagaccacccgcgtcggcggt
ggtcatccgttctatggtgttctcgaagacgccaaaaatgatgccccgcgcaccttgttc
cagcaggatttgtggcattacaccgtggccaagatggttgatgcctgccaatccgccggc
atcaaggcgttctatggcccgttcggcgatttctccgacagcccggcctgtgaggcgcag
ttccgcaacgccttcctgctgggttgcgccggcgcctggagcctgcaccccaaccagatc
gacatcgccaagaaggtgttcagccccgatgtcggcgaagtgctgttcgccaagaaaatc
ctggacgccatgcccgacggcaccggcgcggtgatgatcgacggcaagatgcaggacgac
gccacctggaagcaggccaaggtcatcgtcgatctggcccgcgtcgtcgccgccaaggac
ccggtgatggccgctcaatacggtctgtag
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