Methanosarcina hadiensis: RSJ42_13775
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Entry
RSJ42_13775 CDS
T10775
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSJ42_13775 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhab03400
]
RSJ42_13775 (nth)
Enzymes [BR:
mhab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RSJ42_13775 (nth)
DNA repair and recombination proteins [BR:
mhab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSJ42_13775 (nth)
Prokaryotic type
RSJ42_13775 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
5_3_exonuc
bacHORMA_1
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
XMB88375
LinkDB
All DBs
Position
complement(3213764..3214468)
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AA seq
234 aa
AA seq
DB search
MPEKKPRKLTSNEPVQEYDIPDNRHNFDRIWALLQKEYPDAKPSLNYSNPLELLVATVLS
AQSTDVQINKVTENLFKKYKSAWDYANADLRELEIDIYSSGFYKSKAKNIKAAAQMIIER
YGGEVPRTMEELVTLPGVGRKTANIVLARAFGVIEGIAVDTHVKRVSGRLGLTKNSDPAR
IEQDLISLARKEDLDSFSMTLIYHGRKVCQARKPRCQVCVVKELCPSSIIFIGE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaaaaacccaggaaattgacttccaatgaacccgtgcaggaatatgatatt
cctgataacaggcataactttgaccgtatctgggctcttttgcaaaaagagtatcccgat
gcaaaaccttctttaaactacagcaaccctctggaacttcttgtggcgaccgtcctttct
gcccaatcaacggatgtccagattaataaagtgaccgaaaatcttttcaaaaaatataaa
agtgcatgggattacgcaaacgcagatcttagagaactggaaatagacatttattcttcg
ggcttttacaaaagtaaagcaaaaaatatcaaagctgctgcgcagatgatcatcgagcgc
tatggtggagaagtcccccgcactatggaagaactggtaactcttcccggagtggggagg
aagaccgctaacatagtgcttgccagggcttttggagtaatagagggaattgctgtggat
acccatgtgaaaagggtttccggaaggctggggcttacaaagaattccgaccctgcgaga
attgaacaggatcttatatcccttgcccggaaagaggaccttgattcgttttccatgact
ctgatttatcacgggagaaaagtttgccaggcaagaaaaccaagatgccaggtttgtgtt
gttaaagaactgtgcccctccagcattatctttattggcgagtaa
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