Mycobacterium haemophilum: B586_15750
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Entry
B586_15750 CDS
T04111
Name
(GenBank) aromatic ring-opening dioxygenase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mhad
Mycobacterium haemophilum
Pathway
mhad03030
DNA replication
mhad03410
Base excision repair
mhad03420
Nucleotide excision repair
mhad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B586_15750
03410 Base excision repair
B586_15750
03420 Nucleotide excision repair
B586_15750
03430 Mismatch repair
B586_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhad03032
]
B586_15750
03400 DNA repair and recombination proteins [BR:
mhad03400
]
B586_15750
Enzymes [BR:
mhad01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B586_15750
DNA replication proteins [BR:
mhad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B586_15750
DNA repair and recombination proteins [BR:
mhad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B586_15750
NER (nucleotide excision repair)
GGR (global genome repair) factors
B586_15750
MMR (mismatch excision repair)
DNA ligase
B586_15750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B586_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
Bactofilin
Motif
Other DBs
NCBI-ProteinID:
AKN17709
LinkDB
All DBs
Position
1375672..1377756
Genome browser
AA seq
694 aa
AA seq
DB search
MSSPEADPIGPEVLRQWRELAEEVREHQFRYYVRDAPIISDAEFDRLLVRLAALEEAHPE
LRTPDSPTQLVGGAGFTTDFVATEHLERMLSLDNAFSGDELDAWVTRIRAEIGDDVHYLC
ELKIDGVALSLVYRDGRLTRAATRGDGRTGEDVTLNARTIEDVPERLTASDIYPLPEVLE
VRGEVFFRVADFQALNASLVEEGKNPFANPRNSAAGSLRQKDPAVTARRKLRMICHGLGH
IEGFRPATQHQAYLALQAWGLPVSEHTTLVNDIAGVQGRIAYWGEHRHEVDHEIDGIVVK
IDEVVLQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG
STVGQATLHNAAEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE
CGTTLAPEKEGDADIRCPNARSCPGQLRERVFHVASRSALDIEGLGYEAGVALLAAQVIT
SEGDLFTLTEDDLLRTELFRTKAGELSANGKRLLVNVDKAKAAPLWRVLVALSIRHVGPT
AARALATEFGSVDAIVAASTEQLAAVEGVGATIAAAVTEWFTVDWHRAIVDKWRAAGVRM
ADERDTSVPRTCEGLTIVVTGSLAGFSRDDAKEAIVARGGKAAGSVSKKTAYVVAGDSPG
SKYDKAVELGVPILDEDGFRRLLEQGPPVQQAVE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcccgaagctgaccctatcggacccgaggtgttgcggcagtggcgagagctg
gccgaagaggtgcgcgaacatcagttccgctactacgtgcgggacgcgccgatcatctcc
gacgcggagttcgatcgcctgctggtcaggctcgccgcgctggaggaagcccatcccgag
ctgcgcacgcccgattcccctactcagctggtcggcggtgccggcttcacgactgatttc
gtggcgaccgagcatctcgaacggatgctcagcctcgacaacgcgttcagtggggatgaa
ctcgacgcctgggtcacccgcatccgcgctgagatcggtgatgacgtccattatttgtgt
gagctcaagattgacggtgtcgcattgtcgttggtctatcgggatggacgcctgacccgc
gccgcgactcggggtgatggtcgcaccggcgaggacgtcacgctgaacgcgcggaccatc
gaagacgtgccagaacggctgaccgccagcgatatttacccgctgccagaggttctcgag
gtccgcggcgaggtgtttttccgggtggcggacttccaagcgctcaacgcgagcctcgtt
gaggagggcaagaatccgttcgctaacccacgcaacagcgcggcgggctcgctgcgccag
aaagatccggcggtcacggcccgccgcaagctgcggatgatctgccatggacttgggcac
atcgaaggttttcgccccgccacccagcaccaggcctacttggctttacaggcctggggg
ctgccggtgtccgagcatacgacgctggtgaacgacatagctggcgtccagggacgcatc
gcctattggggcgaacatcgccacgaggtggaccacgaaatcgacgggatagtggtcaaa
atcgacgaggtggtgttgcagcgcaggctgggttccacctcgcgagctccgcgatgggcc
atcgcttacaagtacccacctgaggaagcgcagaccaagctgctcgacatccgggtgaac
gtcggccgcaccgggcgggtcacgccgttcgcgttcatgacgccggtgaaggtggccggg
tcgacggtcgggcaggcgaccctgcacaacgctgctgaggtcaaacgcaaaggcgtgttg
atcggtgacaccgtggtgatccgcaaggccggcgacgtgattcccgaagtcttaggaccc
gtggttgacctgcgcgacgggtccgaacgcgaattcgtcatgcccacaacgtgtcccgag
tgcggcaccacgttggcgccggaaaaggaaggcgatgctgacatccgttgccccaatgcc
aggagctgcccggggcaactgcgagagcgcgtgtttcacgtcgccagccgcagcgcgctc
gacatcgagggactgggatacgaggccggcgttgcgctgctggccgcgcaggtgatcacc
agcgagggtgacctgttcaccctcaccgaggatgacttgttgcgcaccgagcttttccgg
accaaggccggcgagttgtcggccaacggcaaacggttactggtcaacgtcgacaaggcc
aaagccgcaccgctgtggcgagtgctggtggcgttgtcgatccggcatgtcgggccgacg
gcggcgcgagccctggccaccgagttcggcagcgttgacgccatcgtggccgcgtccacc
gagcagctggccgccgtcgagggggtaggtgccaccatcgcggccgcggtcaccgagtgg
ttcaccgtcgactggcatcgcgcgattgtcgacaagtggcgggcggccggggtgcggatg
gccgatgagcgcgacaccagcgtgccgcgcacgtgcgaggggctcaccatcgtcgtcacc
ggctcgttagcggggttttcccgcgacgacgccaaggaggcgatcgtggcgcgcggtggc
aaggccgctggttcggtgtcgaagaagactgcctacgtggtcgccggcgactcgccggga
tccaaatacgacaaggcggtcgagctcggggtaccgatcctcgatgaagatgggtttcgc
cggttgctggagcaggggccaccggtgcagcaagccgtcgaatag
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