Mycolicibacterium hassiacum: MHAS_00925
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Entry
MHAS_00925 CDS
T05715
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mhas
Mycolicibacterium hassiacum
Pathway
mhas03030
DNA replication
mhas03410
Base excision repair
mhas03420
Nucleotide excision repair
mhas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHAS_00925 (ligA)
03410 Base excision repair
MHAS_00925 (ligA)
03420 Nucleotide excision repair
MHAS_00925 (ligA)
03430 Mismatch repair
MHAS_00925 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhas03032
]
MHAS_00925 (ligA)
03400 DNA repair and recombination proteins [BR:
mhas03400
]
MHAS_00925 (ligA)
Enzymes [BR:
mhas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MHAS_00925 (ligA)
DNA replication proteins [BR:
mhas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MHAS_00925 (ligA)
DNA repair and recombination proteins [BR:
mhas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MHAS_00925 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MHAS_00925 (ligA)
MMR (mismatch excision repair)
DNA ligase
MHAS_00925 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MHAS_00925 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
HHH_8
BRCT_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
VCT89238
LinkDB
All DBs
Position
1:973357..975432
Genome browser
AA seq
691 aa
AA seq
DB search
MLTQQAEEAAEGDLRRRWQELAEQVREHQFRYYVRDAPIISDAEFDELFRQLQQLEEEHP
ELRTPDSPTQLVGGAGFSTEFTPVDHLERMLSLDNVFSPEELRAWAARTRDEIGTDVQYV
CELKVDGVALSLVYRDGRLERAATRGDGRTGEDVTLNARTISDIPETLTGTDEFPVPALL
EVRGEVFFRLADFEELNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRKLHMICHGLG
RTEGFDPVTLYDAYRALKAWGLPVSEHTVQVHGIDAVLEHIAYWGEHRHDLDHEIDGVVI
KVDELALQRRLGATSRAPRWAVAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMEPVKVA
GSTVSQATLHNASEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGTEREFVMPTTCP
ECGSPLAPEKEGDVDIRCPNSRYCPAQLRERLFYLAGRGALDIEGLGYEAATALLQAGVI
VDEGDLFTLTEDDLLRCDFFRVKKGELSANGKRLLVNLEKAKTQPLWRVLVALSIRHVGP
TAARALAAQYGSLDTIMAASEEELAAVEGVGPTIAAAVKEWFTVDWHRAIIDKWRAAGVR
MADERDTSIERTLEGLSIVVTGSLSRFSRDEAKEAIVARGGRAAGSVSKKTAFVVAGDSP
GSKYDKAVELGIPILDEDGFLRLLEHGPDGV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacccagcaggccgaggaggccgccgagggcgacctgcggcgccgctggcaggag
ctcgccgagcaggtgcgcgagcaccagttccgctactacgtccgcgacgccccgatcatc
tccgacgcggagttcgacgagctgttccggcaactgcagcagctcgaggaggagcatccc
gagctgcgcacccccgattcgccgacccagctggtcggcggcgccgggttctcgaccgag
ttcacgccggtcgatcacctcgagcggatgctgtcgctggacaacgtgttcagccccgag
gaactgcgggcctgggcggcgcgcacccgcgacgagatcggcaccgacgtgcagtacgtg
tgcgagctcaaggtcgacggggtcgcactgtcgctggtgtaccgcgacgggcggctcgaa
cgagccgccacccggggcgacggccgcaccggcgaggacgtcacgctgaacgcccgaacc
atcagtgacattcccgaaactctgaccggcacagacgaattcccggtacctgcgttgctc
gaggtccgcggtgaggtgttcttccggctcgccgacttcgaggagctcaacgccggtctg
gtcgccgagggcaaaccgccgttcgccaacccgcgcaacagcgccgccgggtcgctgcgg
cagaagaacccagcggtcaccgcacggcgcaaactgcacatgatctgccacgggctgggc
cgcaccgagggtttcgatccggtgaccctctacgacgcgtaccgcgcgctcaaggcatgg
ggcctgccggtctccgagcacaccgtgcaggtgcacggcatcgacgcggtgctcgagcac
atcgcctactggggtgagcaccgccacgatctcgatcacgagatcgacggcgtggtgatc
aaggtcgacgagctggcgctgcagcgccgtctcggcgccacgtcgcgggccccgcggtgg
gcggtggcctacaagtacccgcccgaagaagcccagaccaagctgctcgatatccgggtc
aacgtcggtcgcaccggacgggtcacgccgttcgcattcatggagccggtcaaggtcgcc
ggttccacggtcagccaggcgaccctgcacaacgcgtccgaggtcaaacgcaagggcgtg
ctcatcggcgacaccgtgatgatccgcaaggccggcgacgtgatccccgaggtgctcggg
ccagtggtggatctgcgggacggcaccgagcgcgaattcgtcatgcccacaacgtgtccc
gaatgcggatcaccgctcgccccggagaaggagggggacgtcgacatccgttgccccaac
tcccgctactgtccggcgcagctgcgggagcggctgttctacctcgccggccgcggtgcg
ctcgacatcgaggggctgggctacgaggcggccaccgcgctgttgcaggctggggtgatc
gtcgacgagggcgacctgttcaccctcaccgaggacgatctgttgcgctgcgacttcttc
cgggtcaagaagggggagctgtcggccaacggcaaacgactgctggtcaacctcgagaaa
gccaagacccaaccgctgtggcgggtgctggtggcgctgtcgatccgccacgtcggcccc
accgccgcgcgggcgctggcggcgcagtacggcagcctcgacacgatcatggccgcctcg
gaagaggagctggccgcggtcgagggcgtcggccccaccatcgcggcggcggtgaaggaa
tggttcaccgtcgactggcatcgcgccatcatcgacaagtggcgggccgccggggtgcgg
atggccgacgagcgcgacaccagcatcgagcgcaccctcgagggcctgtctatcgtggtg
accggatcgctgagccggttctcccgcgacgaggccaaggaggcgatcgtcgcgcgaggc
ggacgagccgccggttcggtgtcgaagaagaccgcgttcgtggtggccggcgattcgccc
ggatccaagtacgacaaggcggtggagctgggcatcccgatcctcgacgaggacggtttc
ctgcgtctgctcgaacacgggcccgacggcgtctga
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integrated database retrieval system
