Marinobacter nauticus ATCC 49840: MARHY2356
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Entry
MARHY2356 CDS
T02083
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MARHY2356 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY2356 (nth)
Enzymes [BR:
mhc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MARHY2356 (nth)
DNA repair and recombination proteins [BR:
mhc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MARHY2356 (nth)
Prokaryotic type
MARHY2356 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCG95829
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All DBs
Position
2397867..2398505
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AA seq
212 aa
AA seq
DB search
MNKEKRTEIFSRLREANPNPTTELNYSTPFELLIAVILSAQATDVGVNKATDKLFPVANT
PEAILALGVDGLKEYIKTIGLFNSKAENVIKTCRILIEKHGSEVPARREDLEALPGVGRK
TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKNVLEVEKRLVRLVPKEFLMDAHHWLI
LHGRYTCTARKPKCGACIIEDLCEFKQKRDYQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaaacgtaccgagattttctcccggttgcgggaggctaaccccaatccg
accacagagctcaattacagcacgccatttgagctactgattgcggtcattctctccgct
caggccacagacgtaggcgtgaacaaggccaccgacaagctgttcccggtagcgaacacg
cccgaggccattcttgccctgggcgttgacggcctgaaggaatacatcaagaccatcggc
ctgtttaacagcaaggccgagaatgtgatcaagacctgccgcattctgatcgagaaacac
ggcagtgaagtcccggcccggcgggaagacctggaagccttgcccggcgtcggccgtaaa
acggctaatgtggtgctgaacacagcgttccggcagccagccatggccgtggacacccac
attttccgggtctccaaccgtaccggtatcgcgccgggcaagaatgtactggaagtcgag
aaacgcttggtcaggctggtgccgaaagagttcctgatggacgctcaccactggctgatc
ctgcacggccggtatacctgcacagcccgaaagccgaaatgtggcgcctgcataattgag
gatctgtgcgaattcaagcaaaagcgggactaccagtaa
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