Mesomycoplasma hyopneumoniae J: MHJ_0258
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Entry
MHJ_0258 CDS
T00260
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mhj
Mesomycoplasma hyopneumoniae J
Pathway
mhj03030
DNA replication
mhj03410
Base excision repair
mhj03420
Nucleotide excision repair
mhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHJ_0258 (lig)
03410 Base excision repair
MHJ_0258 (lig)
03420 Nucleotide excision repair
MHJ_0258 (lig)
03430 Mismatch repair
MHJ_0258 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhj03032
]
MHJ_0258 (lig)
03400 DNA repair and recombination proteins [BR:
mhj03400
]
MHJ_0258 (lig)
Enzymes [BR:
mhj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MHJ_0258 (lig)
DNA replication proteins [BR:
mhj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MHJ_0258 (lig)
DNA repair and recombination proteins [BR:
mhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MHJ_0258 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MHJ_0258 (lig)
MMR (mismatch excision repair)
DNA ligase
MHJ_0258 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MHJ_0258 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AAZ44349
LNCC_Brazil:
MHJ0258
UniProt:
Q4AA72
LinkDB
All DBs
Position
305031..307109
Genome browser
AA seq
692 aa
AA seq
DB search
MKKNSQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEE
LNQSPSQKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKASEILKTVTFFVEPKI
DGIALSLFYQNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKINYLEDLEVRGEIYID
NSTFASLQLETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRYLKSFFYTLV
NPEKHKINSQFDSINFLRNLGFQVNPFQKKCSDLKDVFNFISIIKQKRDFLNYNIDGVVV
KVNEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTYNAKIEPVTLA
GSKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSVHNYPKTNFSIVKNCPKCN
SELVNSESGLDQFCQNQFCPEIILQKIVHFCSKNALNIESLAQKRIEKFLEKGLISSACD
IFYLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERAKNIDFYRLIFGLGI
RNVGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDYFNNQKNSEQLNCLE
TVGFNFKTTFLTNQSNSWASFAISGKLSKPRDEYVRIIEESGASFHESLTKKTDFLLLGQ
SAGSKIEKAKKAGIKIINEVQFFDLIKNSKKT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacagtcaaattcgcgcgaaaattattgaactaagagaaaaaattgaaaaa
tgaaatcaccattattaccaattacagaacccacttgtcgatgatttagtatatgataaa
actttaagagaactagaaaaattagaacgcgaaaattttttcttatttagtcttgaagaa
ctaaatcaatcaccaagtcaaaaagttggatcaaaaattacctcaaaatttgaaaaagtt
gctcattcaagtccgatgttatcgcttaataaggcttattcaaatgaggaattggaaaaa
tgagcaaaaaaagctagcgaaattcttaaaacagttacattttttgttgagcctaaaatt
gatgggattgccctatcacttttttaccaaaatggcaatttgattaaggcattaacacgc
ggcgatggagtttttggggaaaatgttttagttaatgcacttaaaattaatgatgaattt
attccgaaaaaaattaattatcttgaagatttagaagtccgtggggaaatttatattgat
aattccacatttgcaagtttacaacttgagacaaaaaaatttaaaaacccccgtaatgct
gcaagcggaattctgcgccgttataaaaatcacaagccaaaaattgatgcaaaaagtatt
aaatttcttgaagaagaatccgattttagatatttaaaaagttttttttatactttagta
aaccctgaaaaacataagataaattcccaatttgatagcattaattttctaagaaactta
ggttttcaagtaaatcctttccaaaaaaagtgctctgatttaaaagatgtttttaatttt
attagcataataaagcaaaaaagagatttcctaaattataatattgatggtgttgtagtt
aaagttaatgaattttctatctatgaaaaattaggctcaacttctaaatttcctcatagc
gcaattgcttttaaattcgaagacgatattgcaaaaactaagcttttagcgatttttgca
acaattggaagaacaggaaaagttacttataatgcaaaaattgagccagtaacactggct
ggaagtaaaatttcatcagcaattttaccaaattattcttatattgaaaatttaaaattg
aatttaaatacagaagtttatataaaaaaagccggcgaaataatcccacaaatcattggt
agcgttcataattatccaaaaactaatttttcaatagtaaaaaattgtccaaaatgtaat
tcagaattagtcaatagtgaatctggacttgatcagttttgtcaaaatcaattttgtcct
gaaattattttgcaaaaaatagtgcatttttgttcaaaaaatgctttaaatattgagtcc
ttagcccaaaaaagaattgaaaaattccttgaaaaaggtttgatttcttcggcttgcgat
attttctatctaaaagataaactcgaattaatctatgaaagattatctaataaaaatcaa
ctacttaccaagcaaaatgcttctcagtcaatgcagattaagtcaattatgaagctatta
aatgaggtcgagagagcaaaaaatattgatttttatagactaatttttggtttgggcata
cgaaatgtgggtctaaaagcagcaaaaattctttcacgttatgcaagtaatctttcagaa
ttgagaaatttagactttaatttacttaaaaatcagcatgattttggccctgttattatt
gaatctctaatcgattattttaataatcaaaaaaattctgagcaattaaattgtcttgaa
actgttgggtttaattttaaaactacttttttaactaatcagtcaaattcctgagctagt
tttgcaatttcgggaaaattgagcaagccacgcgatgaatatgttagaattattgaggaa
tcaggcgcttcttttcatgaatcacttacaaaaaaaactgattttttattgctaggccaa
tctgcgggttcaaagatagaaaaggctaagaaagccgggataaaaatcattaacgaggta
caattttttgatttaattaaaaattctaaaaaaacttaa
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