Microbacterium sp. BDGP8: P6897_13700
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Entry
P6897_13700 CDS
T11498
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mibd Microbacterium sp. BDGP8
Pathway
mibd00300
Lysine biosynthesis
mibd00550
Peptidoglycan biosynthesis
mibd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mibd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P6897_13700
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P6897_13700
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mibd01011
]
P6897_13700
Enzymes [BR:
mibd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
P6897_13700
Peptidoglycan biosynthesis and degradation proteins [BR:
mibd01011
]
Precursor biosynthesis
Amino acid ligase
P6897_13700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WHE35727
LinkDB
All DBs
Position
complement(2841789..2843339)
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AA seq
516 aa
AA seq
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MQDAGEGRKLDPDWWATGVAGGNVPGGRLRGDSRTVQAGDVFVALGRDERVREHITQALE
RDAALVLTDASVTHVDARVRGIPNLAAVIGRLADQYTGRPSADMTLVGVTGTNGKTSTVQ
LLAQSWELLGRRAATIGTLGAGLFGALAKTSLTTPSVVDMHELLADIRRAGADVVAIELS
SHALTQGRVEGCHFDIAAFTNLTRDHLDYHESMEAYGQAKQGVFRLPGVRAAVRNIDDPY
VAGIALPAGLDDVTVSTSGAAAATVRADDIRMRADGADFTLAIQDDRFEVASPLIGRFNI
DNLAMTAGILRAQGVAPGAIARAVGEIRRVPGRMQVVSPGAGPQVVVDYAHTPDALRQAL
IALSGGAGQLTVVFGCTGDRDRGKRPEMAVIAEELAQTIIVTDDDLHHEDGDAIVADILA
GFRSVENVRVIRDRAAAITMAVAPAGPDDIVLIAGKGHESVQIIGDDAVASDDVSIATAA
LREWREKHAAGSGDSQLPRVEGSPASFSAVLSDGSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgctggggagggtcggaaactcgaccctgattggtgggcgacgggggtcgcc
ggggggaacgtacccggcggtcgcctgcgcggcgacagccgcaccgtgcaagccggcgac
gtcttcgtcgcgctcggccgagacgaacgggtccgcgagcacatcacgcaggcgctcgag
cgcgacgcggctctcgtcctgaccgacgcgagcgtcacgcacgtcgatgcgcgggtgcgc
ggcatcccgaacctggccgccgtgatcgggcggctggccgaccagtacaccggtcgtccg
tcggccgacatgacattggtgggcgtgaccggcacgaacggcaagacctcgacggtgcag
ctcctcgcgcagagctgggagctcctcggacgccgcgccgccaccatcggcacactcgga
gccggcctgttcggcgctctggcgaagacgtcgctcacaaccccgtcggtggtcgacatg
cacgagctcctcgccgacatccggcgggccggcgccgacgtggtcgcgatcgagctgagc
tcgcacgccctcacgcagggaagggtcgagggatgccacttcgacatcgccgcgttcacg
aacctcacccgcgaccacctcgactaccacgagtcgatggaagcgtacggccaggcgaag
cagggcgtcttccgccttccgggtgtgcgcgccgcggtgcggaacatcgacgacccctat
gtcgcgggcatcgcgctccccgcgggactcgacgacgtcaccgtctcgacgtccggcgca
gcggcggcgacggtccgcgccgacgacatccggatgcgcgctgacggcgccgacttcact
ctcgcgatccaggacgaccgcttcgaggtagcatcacccctcatcggccggttcaacatc
gacaacctcgcgatgacggcgggcatcctccgcgcacagggcgtcgcccccggcgccatc
gcgcgggcagtgggggagatccgccgggtacccggacgcatgcaggtcgtgtcgcccggc
gccggcccgcaggtcgtcgtcgactacgcccacacgcccgacgccctgcggcaggccctc
atcgccctgtcaggcggcgccggccagctgaccgtcgtgttcggctgcaccggcgaccgc
gaccgtggcaagcgacccgagatggccgtgatcgccgaagagctcgcacagacgatcatc
gtcaccgacgacgatctgcatcacgaagacggcgacgcgatcgtggccgacatcctggcc
ggtttccgctcggtcgagaacgtccgcgtcatccgcgatcgagcggccgcgatcacgatg
gccgtcgcccccgccggtcccgacgacatcgtcctcatcgccggcaagggccacgagtcg
gtgcagatcatcggcgacgacgccgtcgcctccgacgatgtgtcgatcgccacggccgcc
ctccgggaatggcgcgagaagcacgccgccggaagcggcgactctcagttgccgagggtc
gagggctcgcccgcgtcgttctccgcggtgctctccgacggctcgaaatga
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