Micromonospora sp. FIMYZ51: QQG74_06765
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Entry
QQG74_06765 CDS
T10361
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
micf Micromonospora sp. FIMYZ51
Pathway
micf03030
DNA replication
micf03410
Base excision repair
micf03420
Nucleotide excision repair
micf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQG74_06765 (ligA)
03410 Base excision repair
QQG74_06765 (ligA)
03420 Nucleotide excision repair
QQG74_06765 (ligA)
03430 Mismatch repair
QQG74_06765 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micf03032
]
QQG74_06765 (ligA)
03400 DNA repair and recombination proteins [BR:
micf03400
]
QQG74_06765 (ligA)
Enzymes [BR:
micf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QQG74_06765 (ligA)
DNA replication proteins [BR:
micf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QQG74_06765 (ligA)
DNA repair and recombination proteins [BR:
micf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QQG74_06765 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQG74_06765 (ligA)
MMR (mismatch excision repair)
DNA ligase
QQG74_06765 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QQG74_06765 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
HHH_8
Zn_ribbon_TFIIB
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
WZH97008
LinkDB
All DBs
Position
1432288..1434423
Genome browser
AA seq
711 aa
AA seq
DB search
MSEEAIPQQVSAAQEAAAGAEPSPQARERHATLSQELTEHQYRYYVLDAPTVSDAEFDRQ
LRELAALEEEFPALRTPDSPTQRVGGTFSTDFTPVDHAERMMSLDNAFADEELAAWAERV
ERDAGGPVPYLCELKVDGLAINLTYEQGRLVRAATRGDGRTGEDVTANVRSIRDVPSRLT
DSAEYGPVPEFIEVRGEIYFPVAGFADLNASLVEQDKAPFANPRNAAAGSLRQKDPRITA
SRPLRLVVHGIGARRGYQPVTQSESYAALRAWGLPTSDRWRVVPDLAGVRDYIAHYAEHR
HDVEHEIDGVVVKVDPVPIQGRLGSTSRAPRWAIAFKYPPEEVNTKLLNIEVEVGRTGRV
TPRAVLQPVKVAGSTVAYATLHNAREVERKGVLIGDTVVIRKAGDVIPEVLGPVVDLRPP
DAEPFKMPAHCPACGTPLAPAKESDVDIRCPNSRSCPAQLRERVFHLAGRKVFDIEALGY
KSAAALLDAQIIADEGDLFSLDAEQLAGSPFFVNKDGSLGSNAVKLLDNLAVAKQRDLWR
VLVALSIRHVGPTAAQALARQFGSIEAIDNATEEELSAVDGVGPTIAASIREWFAVDWHR
EVVRKWAEAGVRMAEAAVPEGARPLEGVTVVVTGTLSGYSRDQATEAIQSRGGKVSGSVS
KKTGFVVVGDNPGSKADKAATLKVPVLDEEGFRVLLDAGPEAARAVARVEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaggaagcgattcctcagcaggtcagcgcggcgcaggaggcggcggcgggagcc
gagccgagcccgcaggcgcgggagcggcacgccacgctcagccaggagctgaccgagcac
cagtaccgctactacgtgctcgacgcaccgaccgtctccgacgccgagttcgaccggcaa
ctgcgcgagctggcagcgctggaggaggagttcccggcgctgcgtacgcccgactcaccg
acccagcgcgtgggtggcaccttctccaccgacttcaccccggtcgaccacgccgagcgg
atgatgtcgctggacaacgccttcgccgacgaggagctggccgcctgggcggagcgggtc
gagcgggacgccggtggtccggtgccctacctgtgcgagctgaaggtcgacgggctggcg
atcaacctgacctacgagcagggccggctggtccgggccgcgacccggggtgacggccgc
accggcgaggacgtcacggcaaacgtccgcagcatccgggacgtgccgagccggctcacc
gactccgcggagtacggcccggtccccgagttcatcgaggtgcgcggggagatctacttc
ccggtcgcgggcttcgccgacctcaacgccagcctggtcgagcaggacaaggctcccttc
gccaacccgcgcaacgccgccgccggcagcctccggcagaaggatccccggatcaccgcg
tcccgaccgttgcgcctggtggtgcacggcatcggcgcccgccgtggctaccagccggtc
acccagtccgagtcgtacgccgccctgcgcgcctggggcctgccgaccagcgaccggtgg
cgggtggtgcctgacctggccggcgtccgggactacatcgcgcactacgccgagcaccgg
cacgacgtcgagcacgagatcgacggggtggtggtgaaggtcgatccggtgccgatccag
ggccggctcggctcgaccagccgggcaccccgctgggcgatcgccttcaaatatccgccg
gaggaggtcaacaccaagctgctcaacatcgaggtcgaggtcgggcgtaccgggcgggtc
accccccgagccgtgctgcaaccggtaaaggtggccggctccaccgtcgcgtacgcgacc
ctgcacaacgcccgtgaggtcgagcgcaagggggtgctgatcggcgacacggtggtgatc
cgcaaggccggcgacgtgattcccgaggtgctcggccccgtggtcgacctgcgtccaccc
gatgcggagccgttcaagatgccggcgcactgcccggcctgcggcacgccgctggccccg
gccaaggagagcgacgtcgacatccgctgccccaactcgcgtagctgcccggcgcagctg
cgcgagcgggtcttccacctggccgggcggaaggtgttcgacatcgaggcgctcggttac
aagagcgccgccgcgctgctcgacgcgcagatcatcgccgacgagggcgacctgttctcg
ctcgacgcggagcagttggccggctcgccgttcttcgtcaacaaggacggcagcctcggc
agcaacgcggtcaagctgctcgacaacctggccgtggccaagcagcgtgacctgtggcgg
gtgcttgtggcgctctccatccggcacgtggggccgaccgccgcgcaggccctggcccgg
cagttcggctcgatcgaggcgatcgacaacgccaccgaggaggaactctccgccgtcgac
ggggtcgggccgacaatcgccgccagcatccgcgagtggttcgccgtcgactggcaccgc
gaggtggtccgcaagtgggccgaggcgggcgtacggatggccgaggcggcggtcccggaa
ggcgcccgtccactggagggggtcacggtggtggtcaccggcaccctgagcggatactcc
cgggaccaggccaccgaggcgatccagtcccggggcggcaaggtcagcggctcggtctcg
aagaagaccggtttcgtggtggtcggcgacaaccccgggtccaaggcggacaaggcggcc
accctcaaggtgccggtcctcgacgaggagggtttccgggtgctgctcgacgcgggtccg
gaggcggcccgcgcggtggcccgcgtcgaggagtga
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