Microbulbifer sp. YPW1: HUW35_10345
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Entry
HUW35_10345 CDS
T10374
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
micy Microbulbifer sp. YPW1
Pathway
micy01501
beta-Lactam resistance
micy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUW35_10345
01503 Cationic antimicrobial peptide (CAMP) resistance
HUW35_10345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
micy03036
]
HUW35_10345
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
micy02000
]
HUW35_10345
01504 Antimicrobial resistance genes [BR:
micy01504
]
HUW35_10345
Chromosome and associated proteins [BR:
micy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HUW35_10345
Transporters [BR:
micy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HUW35_10345
Antimicrobial resistance genes [BR:
micy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HUW35_10345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
BSH_RND
BSH_CzcB
RND-MFP_C
Beta-barrel_YknX
CzcB_C
Biotin_lipoyl
YknX_C
BSH_YknX
BSH_CusB
HH_YBHG
HH_EMRA
HH_MFP_RND
UPF0154
FlgN
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
QKX17366
LinkDB
All DBs
Position
2522027..2523220
Genome browser
AA seq
397 aa
AA seq
DB search
MSLAKQLFNRRMFWMLLGCLLVFGGIFGFKLFGKYMMNQFMDNMSLPPATVSTARVAQQR
WQTTLAAVGSVRAINGVDVTTQAQGEVKAIYFESGQQVEKGTLLAELTANPETAQIDVLE
AERRLADRDYKRISELYKKGVATLRELDQAKAARDQVLANLSVQRATIAERTITAPFSGQ
LGIRQVDLGQNVAPGDAVVSLQQLQPIYVDFSLAEQDFSRVELGQQITLNAAAVPDEEFN
GRITAIDPAIDPRNRTFLLQATLENNQRRLRPGMFADVSVEVEKFRTVLVVPRTAISYAP
YGNAVFVIRKPQKKPADSAAQGRAPKKDTAQQPQWVAVKRFVKTGEERGDLIEITQGLEA
GEQVATSGLLKLRNEGSVIINNENPPPDQLSPQPDNS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggcaaagcagctgtttaaccggcgcatgttctggatgttgctggggtgcctg
ttggtgttcggcggtattttcggtttcaagttgtttggcaagtacatgatgaaccagttt
atggacaacatgtcgttgccgcctgccaccgtcagcaccgccagggtggcccagcagcgc
tggcagacgactctcgccgcagtgggcagtgtgcgtgccatcaacggtgtcgacgtcacc
acccaggcccagggtgaagtcaaagccatttatttcgagtccggccagcaggtggaaaaa
gggaccctgctggcggagctcactgccaacccggagaccgcacagatagacgtgctggag
gctgagcgccggctcgcggaccgggactacaaacggatatccgaactctacaaaaagggc
gtggccacactgcgtgagctggatcaggccaaagccgcccgcgatcaggtgcttgcgaat
ctttcagtgcagcgtgccaccatagctgagcgcacgatcaccgccccgttctccgggcaa
ctgggaattcgccaggtcgacctcggccagaatgttgcgcccggcgatgcggtagtttcc
ctgcagcaattgcagcccatctatgttgatttttccctcgctgagcaggacttcagtcgt
gtcgaactgggtcaacagatcaccctcaatgccgctgcagtgcccgatgaggaatttaat
gggcgtattactgcgatcgatcccgccatagacccgcgcaatcgaacctttctgctccag
gccactctggaaaataatcagcgccggctgcgaccgggtatgttcgcggatgtttcggta
gaagtggaaaagtttcgcaccgtgctggtggtaccgcgcaccgccattagttatgcaccc
tacggcaacgcagtattcgtgatccgcaaaccgcagaaaaaaccggcggattctgcggcg
caggggcgcgcgcccaagaaggatactgcgcaacagccgcagtgggtcgcagtaaagcgg
ttcgtgaaaaccggggaagagcggggggacctgattgaaattacccaggggctggaagcc
ggtgagcaggtcgctaccagcgggttgctgaagctgcgcaatgagggcagcgtgatcatc
aataacgaaaacccgcccccggaccagttatcaccgcaaccggataacagttag
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