Mycolicibacterium insubricum: MINS_19530
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Entry
MINS_19530 CDS
T06933
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03030
DNA replication
mij03410
Base excision repair
mij03420
Nucleotide excision repair
mij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MINS_19530 (ligA)
03410 Base excision repair
MINS_19530 (ligA)
03420 Nucleotide excision repair
MINS_19530 (ligA)
03430 Mismatch repair
MINS_19530 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mij03032
]
MINS_19530 (ligA)
03400 DNA repair and recombination proteins [BR:
mij03400
]
MINS_19530 (ligA)
Enzymes [BR:
mij01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MINS_19530 (ligA)
DNA replication proteins [BR:
mij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MINS_19530 (ligA)
DNA repair and recombination proteins [BR:
mij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MINS_19530 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MINS_19530 (ligA)
MMR (mismatch excision repair)
DNA ligase
MINS_19530 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MINS_19530 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
BBZ66524
LinkDB
All DBs
Position
2014727..2016808
Genome browser
AA seq
693 aa
AA seq
DB search
MSGTDPDLEADSADSGLRHRWQELSEEVRDHQFRYYVRDAPIISDAEFDTLLRRLQELED
AHPELRTPDSPTQLVGGAGFQTDFTPAAHLERMLSLDNVFNVEELAAWTSRVDAEIGSDE
HFLCELKIDGVALDLIYRDGRLDRAATRGDGRTGEDVTLNARTISGIPAQLTGTADYPLP
AVLEVRGEVFFRVEDFAELNAGLIADGRTPFANPRNSAAGSLRQKNPAVTARRPLRMICH
GLGHAEGFNPPTLHDAYLAMAAWGLPVSEHTTRVRGLAAVEERIRYWGEHRHDVDHEIDG
VVVKVDEMALQRRLGATSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAHMEPV
RVAGSTVSLATLHNGSEVKRKGVLIGDTVVIRKAGDVIPEVLGPVTELRDGTQREFVMPT
HCPECGSPLAPAKEGDVDVRCPNARSCPAQLRERVFHLAGRGAFDIEGLGYEAATALLAA
GVITDEGDLFDLTAEDLMRADFFVTNKGELSANGARLLANLGTARKQPLWRVLVALSIRH
VGPTAARALAGHFGTLDSIEAASQQQLADVEGVGPTIAAAVIDWFTVDWHRAIVDKWRAA
GVRMADERDTSIERTLEGLSVVVTGSLTGFSRDQAKEAILARGGKAAGSVSKKTAYLVAG
DAPGSKYDKAVELGVPILDEDGFVRLLEDGPPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaaccgatcccgatctggaagccgattctgcggattccggcctacgccaccgg
tggcaggagctgtccgaggaggtgcgcgatcaccagttccgctactacgtccgcgacgca
ccgatcatcagcgacgccgagttcgacacgctgctgcgccggctgcaggagctggaggac
gcccaccccgaactgcgcacccccgattcgccgacgcagctcgtcggcggcgccggattc
cagaccgatttcaccccggccgcccacctggagcggatgctcagcctcgacaacgtgttc
aacgtcgaggaactggcggcctggaccagccgggtggacgccgagatcggctcggacgag
catttcctctgcgagctcaagatcgacggcgtcgcactggacctgatctaccgcgacggc
cggctcgaccgggcggccacccgcggcgacgggcgcactggtgaggatgtgacactcaac
gcgcgcaccatctccggtatccccgcccaactcaccggcaccgccgactatccgctgccg
gccgtgctggaggtgcgcggcgaggtgttcttccgggtggaggatttcgccgagctcaac
gccggactgatcgccgacggcaggaccccgttcgccaacccccgcaacagcgcggccggc
tcgctgcggcagaagaacccggccgtcacagcgcggcggccgctgcggatgatctgccac
gggctcgggcacgccgagggattcaacccgcccaccctgcacgacgcctacctcgccatg
gcggcctgggggctgccggtttccgagcacaccacccgggtccggggcctggccgccgtc
gaggagcgaatccgctactggggggaacaccgccacgacgtcgaccacgagatcgacggc
gtggtggtcaaggtcgatgagatggcgctgcagcgccgcctcggggccacgtcgcgggct
ccgcggtgggcgatcgcctacaaatatccgccggaggaggcccagaccaaactgctcgac
atccgggtcaacgtcgggcggaccgggcgcgtcaccccgttcgcccatatggaaccggtt
cgggtcgcggggtcgacggtgtcgctggccaccctgcacaacggctcggaggtcaaacgc
aaaggcgtactgatcggtgacaccgtcgtcatccgcaaggccggtgacgtcatccccgag
gtgctcggtccggtcaccgaactgcgcgacggcacgcagcgcgagttcgtcatgcccacc
cactgccccgagtgcggcagcccgctggccccggccaaggagggcgacgtcgacgtccgt
tgcccgaacgcccgcagctgcccggcgcaactgcgcgaacgcgtcttccacctggccgga
cgcggtgccttcgatatcgaagggctgggttatgaggcggccaccgcgctgctggccgcc
ggggtcatcaccgacgagggggacctgttcgacctcaccgccgaggacctgatgcgggcc
gacttcttcgtcaccaacaagggtgagctgtcggccaacggtgcccggctgctggcgaat
ctgggcacggccagaaagcagccgctgtggcgggtgctggtggccctgtccatccggcac
gtggggccgacggcggcccgcgcgctggccggtcacttcggcaccctggattcgatcgaa
gcggcgagccagcagcagctggccgacgtcgagggcgtcggcccgaccatcgccgccgcg
gtcatcgactggttcaccgtggactggcaccgggcgatcgtggacaaatggcgggcggcc
ggggtccggatggccgacgagcgcgacacgtcaatcgaacgaactctggagggcctgtcc
gtcgtggtgaccggctcgctgaccggattctcccgggaccaggcaaaagaggcgatcctg
gcgcgcggcggcaaggcggcggggtcggtgtcgaagaagaccgcgtacctggtcgccggt
gacgcaccgggctccaaatacgacaaggccgtcgagctgggggtgccgatcctcgacgag
gacggcttcgtccggctgctggaggacgggccgccggcctga
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