Micromonospora sp. L5: ML5_1521
Help
Entry
ML5_1521 CDS
T01379
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03030
DNA replication
mil03410
Base excision repair
mil03420
Nucleotide excision repair
mil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML5_1521
03410 Base excision repair
ML5_1521
03420 Nucleotide excision repair
ML5_1521
03430 Mismatch repair
ML5_1521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mil03032
]
ML5_1521
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_1521
Enzymes [BR:
mil01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ML5_1521
DNA replication proteins [BR:
mil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ML5_1521
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ML5_1521
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML5_1521
MMR (mismatch excision repair)
DNA ligase
ML5_1521
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ML5_1521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
HHH_8
Topo-V_HhH_2_2nd
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADU07058
LinkDB
All DBs
Position
1548722..1550875
Genome browser
AA seq
717 aa
AA seq
DB search
MSEGGGVSEEAVPPAVDAAQDAAAGAEPTPAARERHATLSQELTEHQYRYYVLDAPTVTD
AEFDKQLRELEALEAEYPALRTPDSPTQRVGGTFSTDFTPVTHAERMLSLDNAFADEELA
AWSERVERDAGGPVPYLCELKVDGLAINLTYEKGRLVRAATRGDGRTGEDVTANVRSIKG
VPARLTPAGDFPDVPDLIEVRGEIYFPVAAFADLNASLVEQGKAPFANPRNAAAGSLRQK
DPRVTASRPLRLVVHGVGARTGFRPAAQSESYAALKAWGLPTSDRWRVVDDLAGVAEYIA
YYGRHRHDVEHEIDGVVVKVDPVSIQGRLGSTSRAPRWAIAFKYPPEEVNTKLLDIEVEV
GRTGRVTPRAVLQPVRVAGSTVAYATLHNAREVERKGVLIGDTVVLRKAGDVIPEVLGPV
VELRPADARPFVMPTTCPACGTPLAPAKESDVDIRCPNGRACPGQIRERVFYLASRKVLD
IEVLGEKGAAALLDAQIITNEGDLFQLDAEQLSRSPFFVNKDGSLGSNATKLLDNLAEAK
ERDLWRVLVALSIRHVGPTAAQALARHFRSVAAIEAAGEEELSSVDGVGPTIAASVKEWF
AVDWHRDVVRKWAEAGVRMAEEAADEGPRPLDGITVVVTGTLGGFSRDQAAEAIQVRGGK
VTGSVSKKTGFVVVGDNPGSKADKAATLKLPILDEDGFRVLLDSGPEAAREVARVED
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaggcggcggcgtgtccgaagaagcggttcccccagcggtcgacgcggcccag
gacgcggcggcgggtgccgagccgaccccggcggcccgggagcggcacgccacgctcagc
caggagctgaccgagcaccagtaccgctactacgtgctcgacgcgccgacggtcaccgac
gcggagttcgacaagcagctgcgggagctggaggcgctggaggccgaatatccggcgttg
cgcacccccgactcgcccacccagcgggtcggcggcaccttctccaccgacttcacgccg
gtcacgcacgccgagcggatgctctcgctcgacaacgccttcgccgacgaggaactggcc
gcctggtcggagcgggtcgagcgcgacgccggcggcccggtgccctacctgtgcgagctg
aaggtcgacgggctcgccatcaacctcacctacgagaagggccggctggtgcgcgcggcc
acccggggcgacggccgcaccggcgaggacgtcaccgccaacgtgcgcagcatcaagggc
gtgccggcccggctgaccccggccggcgacttccccgacgtgcccgacctgatcgaggtg
cgcggcgagatctacttcccggtggccgcgttcgccgacctgaacgcgagcctggtcgag
cagggcaaggcgccgttcgccaacccgcgcaacgccgccgccggaagcctgcggcagaag
gacccccgggtgaccgcctcccgcccgctgcgcctggtggtgcacggcgtcggcgcgcgc
accgggttccggccggccgcgcagtccgagtcgtacgccgcgctcaaggcgtgggggctg
cccaccagcgaccggtggcgggtggtggacgacctggccggcgtcgcggaatacatcgcc
tactacggcaggcaccggcacgacgtcgagcacgagatcgacggcgtggtggtcaaggtc
gacccggtctccatccagggccgcctcggctcgaccagccgcgcgccccgctgggcgatc
gccttcaagtacccgccggaggaggtcaacaccaagctgctcgacatcgaggtggaggtc
gggcgcaccggccgggtcaccccgcgcgccgtgctccagccggtgcgggtggccggctcc
accgtcgcctacgccaccctgcacaacgcccgcgaggtcgagcgcaagggtgtgctcatc
ggcgacacggtggtgctgcgaaaggccggcgacgtgatccccgaggtgctcggcccggtg
gtcgagctgcgcccggccgacgcccgcccgttcgtcatgcctaccacctgcccggcctgc
ggcacgccgctcgcgccggccaaggagagcgacgtcgacatccgctgccccaacgggcgg
gcctgccccggtcagattcgcgagcgggtcttctacctggccagccgcaaggtgctcgac
atcgaggtgctcggcgagaagggcgcggcggcgctgctggacgcccagatcatcaccaac
gagggcgacctgttccagctcgacgccgagcagttgagccggtcgccgttctttgtcaac
aaggacggcagcctgggcagcaacgccaccaagctgctcgacaacctcgccgaggccaag
gaacgcgacctgtggcgggtgctggtggcgctgtccatccggcacgtcggcccgaccgcc
gcccaggcgctcgcccggcacttccgctcggtcgccgcgatcgaggccgccggtgaggag
gagctgtcctcggtggacggcgtcggcccgaccatcgcggcgagcgtcaaggagtggttc
gccgtcgactggcaccgcgacgtggtgcgcaagtgggccgaggcgggcgtacggatggcc
gaggaggccgccgacgaggggccgcgaccgctcgacgggatcacggtggtggtcaccggc
acgctcggcgggttcagccgcgaccaggcggccgaggcgatccaggtccggggcggcaag
gtgaccggctcggtctccaagaagacgggcttcgtggtggtcggcgacaatcccggctcc
aaggcggacaaggccgccaccctgaaactgccgatcctcgacgaggacggattccgcgtg
ctgctggactccggcccggaggcggcccgcgaggtggcccgggtggaggactga
DBGET
integrated database retrieval system
