Mangifera indica (mango): 123196101
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Entry
123196101 CDS
T07684
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minc03400
]
123196101
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
123196101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4_2
ResIII
zf-C3HC4
zf-C3HC4_3
DEAD
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-rbx1
zf-RING_6
FAD_binding_2
TPR_NUP160_120_M
Motif
Other DBs
NCBI-GeneID:
123196101
NCBI-ProteinID:
XP_044465918
LinkDB
All DBs
Position
14:complement(6356185..6364048)
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AA seq
971 aa
AA seq
DB search
MELRSRRRIGESSSRGNKQDQEDGKKGVGTETVEENLTISQNRANCESDAIFMEARDQNI
VATEGDVGAPAELEEKRPFFSPVHGKEDIEFDMKIEQPLKKRSNREMIPGGWQVKNHKKD
YLTKPHAFYDDELYVPSSDSDLSKSSDESEGLEFLDYVQRQNCAVLSESSEEVEYSKQGN
NKLQEIQGDGNGFNRKKKTTGRGKKQKKHPTLLWEIWEEEHERWIDEHQMNDVDLDQQNT
IISETADEPPDLVKPLLRYQKEWLAWALKQEESVVRGGILADEMGMGKTVQAIALVLAKR
KFSLTMGEPEGLSGSSTILPGVKCTLVICPVVAVRQWESEINKFTSIGSTKVLVYHGSNR
EKSAKQFLDYDFVITTYNTVEAEYRKYMMPPKQKCPYCRKPFYQKKLVIHLKYFCGPNAV
RTAKQSKQEKKKTKASKFMLNQCMESAEGKSTPDEACMDKRHGKRKSFEMGSSSAGVNNL
SRGRSLLHSVKWVRIILDEAHYIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSL
VRFLQIIPYSYYLCKDCDCRVLDYSSTECPNCPHSSVRHFCWWNRYVATPVQAHGNLDKG
KRAMILLKHKILKNIVLRRTKKGRAADLALPPRVISLRRDSLDIREADYYESLYSESQAQ
FNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSQTAALKGGSGADAEPVKKICGVC
HDLADDPVVTTCAHAFCKACLLDSSALKFRTKCPTCLIPLTVDFITHESARDCTGKTTIK
GFKSSSILNRIQLDEFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHK
SGIGCVQLVGSMSIDARDAVIKKFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWN
PAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERVLKLQEKKELVFEGTVGGSADALGKL
TEADMRFLFVT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcgacgaattggtgaatcatcttcccgcggaaataagcaagac
caggaagatggtaaaaaaggggtaggaactgagactgtagaggaaaatttaaccatttcc
caaaatagagccaattgtgagtcagatgccatattcatggaagcaagggatcagaacata
gttgcaacagaaggtgatgttggtgcacctgccgaattggaggaaaagaggcctttcttt
tcccctgtgcatggtaaggaggatattgaatttgatatgaagatagaacagcctctcaag
aagagatccaatcgtgagatgattccaggtggttggcaagtaaagaatcataagaaagat
tacctgactaagccacatgctttttatgatgatgagctttacgtgccttcttcagattct
gatcttagcaagtccagcgatgaaagtgaaggattagagtttttggactatgttcaaaga
caaaactgtgctgtcttatcagagagtagtgaggaggttgaatattcgaagcaagggaat
aataaactacaagaaattcaaggggatggaaatggtttcaatcggaagaagaaaactaca
ggaagggggaaaaagcagaagaaacatccaactttgttgtgggaaatttgggaagaagag
catgaaagatggattgacgagcatcaaatgaatgatgttgatttggatcagcagaataca
ataataagtgagactgctgatgagccaccggatttggtcaagccactgctgaggtatcag
aaggaatggttggcctgggctttaaaacaggaagaatctgttgtcagggggggaatcctt
gcagatgagatgggaatggggaagactgttcaagcaatagcccttgtccttgccaagcga
aaattttccctgacaatgggtgaacctgaaggactgtctggttcatcaaccattcttcct
ggagttaaatgcacccttgtaatttgtcccgttgttgctgtgagacagtgggaatctgag
atcaataagtttacatcaataggaagcaccaaagtgctggtctatcatggatccaacaga
gagaagagtgctaagcaatttctggattatgattttgtcataacaacatacaataccgtt
gaagctgagtacaggaagtacatgatgccacccaagcagaaatgcccatattgcaggaag
cctttttatcagaagaagcttgttattcatctgaaatatttttgtgggcccaatgctgtg
agaactgctaagcaatctaaacaagagaagaaaaagacgaaagcttcaaaatttatgttg
aatcaatgtatggaatctgctgaaggaaagagcacgccagatgaggcctgtatggataag
agacatggcaagagaaaatcatttgaaatgggttcttcatcagcaggtgtaaataacttg
tccagagggagatcccttttgcactctgtgaagtgggtgcgaattattttggatgaggct
cattatataaaagatagacgcagtaatactgcaaaggctgttcttgctttagagtcttca
tacaaatgggctttaagtggcactcctcttcagaaccgtgttggggaactttactctttg
gttcgcttcttacaaataattccatactcatattacttgtgcaaggattgtgactgcagg
gttcttgattacagttcaacggaatgcccaaactgccctcatagttctgtgaggcatttt
tgttggtggaatcgatatgtggccactccagtgcaagcacacggaaatcttgacaaagga
aaaagagctatgatattgctgaagcataaaattttgaaaaacatagttctaagacgaact
aaaaaaggcagagctgctgatcttgctcttcctcctagagttatttcattgaggcgggat
agcctggatattagagaagcagactattatgagtcgttatatagcgaaagccaggcacaa
tttaacacatatgtccaagcaggtacagtgatgaataactatgctcatatatttgatctc
ctcacacgattgcggcaggcagttgatcatccttacctagtggtatattctcaaactgct
gcactaaaaggtggaagcggggctgatgctgaacctgttaaaaaaatatgtggtgtttgc
catgacttagctgatgatcctgtggttaccacttgtgcacatgccttttgtaaagcttgt
ttgttggattcttctgctttaaagttcagaacaaagtgccctacatgtttaattccactt
actgttgattttattacccatgagagtgccagagattgtactggtaaaacaacaattaag
gggtttaagtcgtcaagtattctaaacagaattcaacttgacgaatttcagacaagcaca
aaaatagaggctttgagagaagaaattaggttcatggttgaaagagatggttctgcaaaa
ggaattgttttcagccagttcacatcattcttagatcttataaattactctcttcataag
tctggcataggttgtgttcagttagtgggaagtatgtctatagatgccagagatgcggtg
atcaagaaatttacagaagatcctgattgcaggatttttctcatgagcttgaaagctggg
ggtgttgccctcaatcttacagttgcatcacatgtctttctgatggatccttggtggaac
ccagcagtggaacgacaagcccaggatagaattcaccggataggacagtataagccaatc
aggattgtgagatttgtgattgaaaacacaattgaggaaagggttttgaaactgcaagag
aagaaggaactagtgtttgaagggactgtaggcggaagtgcagatgctttggggaaattg
acggaggccgatatgagatttctgtttgtgacataa
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