Mangifera indica (mango): 123196852
Help
Entry
123196852 CDS
T07684
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123196852
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123196852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123196852
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123196852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
123196852
NCBI-ProteinID:
XP_044466932
LinkDB
All DBs
Position
2:complement(309163..313995)
Genome browser
AA seq
802 aa
AA seq
DB search
MKAGLLFLRASTTHSKDYIFDNFFFIYLLQLQRTFDVFNAFGFVTFHFFQELSQSSIMPL
FELYRMSKEKIDSSKEDKNPTSTDLSFEPENDFVELVWENGQILMQGQSSRTRKSPITNS
LPSHTAKTRDKDIGYGSNTKMTKFGTVDSVLNEIPLSVPSGEMSLNQDDDMVPWLSYPIE
ESLPHEYCSNFLPELSGVTENDLSNQNNFALFDKRGSGSQFNREFNSVSVHNDASLDHGN
VSKNSSIGAGEAMRPKSSTSQSYPSSSLQCQTSFPYLKSRALDNIGNSMKNSTQSSVFGD
SAPSSAGSFPGIKMQKQDTRLSTNSTGLMNFSHFQRPATLFKSNLQNICSTPGSGLSRIE
GMDSKDGGSAASGTNLVESTHNDLSSGIRKGASSDCQPVVAPPKVDVKPSEAKPPEEPVV
AEPHEAIGQEDASKNDKNHIQVLGESATKRLSDGEKTIEPVLAASSVCSGNSVERASDDP
TDNLKRKHRDTEDSECPSEDIEEESVGAKKRATARVGTGSKRSRAAEVHNLSERRRRDRI
NEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPSAMQQM
HAAHMAHYSQMGIGMGMGVGYGMGMPDMNGGSSGYPMVPVPLMHGAHFPGPPVSGPSAFH
GMAGSNFQLFGLHGQGHPISMPHAPFPLSGGPIMKPAMGLNACGTVGHMENLDSAAGTTS
KDLMQTNTSQAMPKAATNSSMNQTLQNTATNNSMHQTSNQCQATNGRLEQPPEVQDSCLA
SEGTFSSPGKNDNVPNKAACYE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctggacttctctttcttcgagcttcaactactcactctaaagattacattttt
gataacttttttttcatttatcttcttcaactacaacgcacttttgacgtttttaatgca
tttggattcgtgacctttcacttcttccaggaactctctcagtcttccatcatgcctttg
tttgagctatatcgtatgagcaaagagaagattgattcatcaaaggaggataagaaccct
acatcaactgatttatcttttgagcctgagaatgactttgttgaactagtatgggagaat
ggtcagattttgatgcagggtcagtctagtaggaccagaaagagtcctataacaaatagc
ttaccatctcacaccgccaagaccagagacaaagatattggatatggcagcaatacaaag
atgacaaagtttggtacagtggactctgtgttgaatgagattcctttatcagtgccatct
ggtgaaatgagtttgaatcaagatgatgacatggttccttggttgagttatcctattgaa
gaatctttaccacatgaatactgttcaaatttcttgcctgagttgtctggagtcactgaa
aatgatctctccaaccagaataattttgcattgtttgataagagaggcagtggtagtcag
ttcaatagggaattcaattctgtttcagtgcataatgatgcaagtttagatcatgggaat
gtgtcgaagaattcttcgataggagctggtgaggctatgagaccaaagagtagtactagt
caatcatacccatcgtcatcattgcaatgccaaacctcatttccatatcttaaatcaaga
gctcttgataatattggtaatagtatgaagaattcgacccaaagttctgtttttggtgat
tctgctcctagttcagctggaagttttccaggtataaaaatgcagaagcaagatacaagg
ttgtctactaatagcactggtttgatgaacttttctcatttccaacgacctgccactctt
tttaaatctaatcttcagaatatttgttcgacacctggttctggtttatcaaggatagaa
gggatggatagcaaggatggggggtctgcagcaagtggtaccaatcttgttgaatccaca
cataatgatttgagtagtggtataagaaaaggagcaagttccgattgtcaacctgtggtt
gcaccaccaaaggttgatgtaaagccatctgaagctaagcctcccgaggaaccagttgtt
gccgaaccacatgaggctataggccaagaagatgcatcaaagaatgataaaaaccatatc
caagttcttggtgaaagtgcaactaaacgactgtcggatggtgagaagactatagagcca
gtacttgctgcttcttctgtttgctcaggcaacagtgtagagagagcttcagatgatcca
acagataatttgaagagaaaacatcgtgacactgaggattctgaatgtcctagtgaggat
attgaagaagaatcggtgggtgcaaagaaaagagccactgctcgagttggtacaggctct
aagagaagccgagcagcagaagtgcataatctatctgaaaggaggcgaagggataggatc
aatgaaaagatgcgtgctttacaagaacttataccaaactgtaataaggtggacaaagct
tcaatgcttgacgaggccattgagtatcttaaaacacttcaacttcaagttcaaattatg
tcaatgggagctggtttgtatatgccacctatgatgttcccatcagcaatgcaacaaatg
catgcagctcatatggctcattactcccagatgggtattggaatgggaatgggtgttggc
tatggaatgggtatgcccgatatgaatgggggatcgtctggttatcccatggttccggtg
cctctgatgcatggggcacattttccaggcccaccagtgtcaggaccctctgctttccat
gggatggcaggatctaacttccagctgtttgggcttcatggtcaaggacatcccatctca
atgccacatgcaccctttcctttatcaggagggcctattatgaagccagccatgggacta
aatgcctgtggcacagtaggtcatatggaaaatctggattcagctgcaggcacaacctca
aaggatctgatgcagacgaacacttctcaagcaatgccaaaggctgctaccaatagttca
atgaatcagacattgcaaaacaccgctaccaataattcaatgcatcagacatctaatcag
tgtcaggcaacaaatggacgcttagaacagcctccggaagtgcaagatagttgtctagcc
tcagaaggtactttcagttcacccggcaaaaatgacaatgtacctaataaagcagcctgt
tatgaatga
DBGET
integrated database retrieval system
