Mangifera indica (mango): 123200043
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Entry
123200043 CDS
T07684
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04120
Ubiquitin mediated proteolysis
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123200043
04120 Ubiquitin mediated proteolysis
123200043
09124 Replication and repair
03420 Nucleotide excision repair
123200043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123200043
03400 DNA repair and recombination proteins [BR:
minc03400
]
123200043
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
123200043
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123200043
Multi subunit type E3
SCF complex
Ring finger protein
123200043
Cul2 complex
123200043
Cul3 complex
123200043
Cul4 complex
123200043
Cul7 complex
123200043
Cul8 complex
123200043
Cul9 complex
123200043
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123200043
TCR (transcription coupled repair) factors
Cul4-CSA complex
123200043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123200043
NCBI-ProteinID:
XP_044471064
LinkDB
All DBs
Position
17:4233709..4240617
Genome browser
AA seq
118 aa
AA seq
DB search
MASLDSDVTMVPATEASSSSAPSSSSKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggactccgatgttacgatggttcctgccactgaggcatcaagcagttct
gctccttcttcatcctccaagaagcctaaacgtttcgagatcaagaaatggagcgccgtt
gccctctgggcttgggatattgttgtcgataactgtgcgatttgcagaaaccatatcatg
gatctctgcatcgagtgtcaagcgaaccaggccagcgccacgagcgaggaatgcactgta
gcttggggggtttgcaatcatgccttccactttcactgcatcagtcgatggcttaagact
cgacaagtttgcccactagataatagtgagtgggagttccagaagtatgggcactag
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