KEGG   Mangifera indica (mango): 123200472
Entry
123200472         CDS       T07684                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1B-like isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
minc  Mangifera indica (mango)
Pathway
minc03008  Ribosome biogenesis in eukaryotes
minc03013  Nucleocytoplasmic transport
minc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123200472
   03008 Ribosome biogenesis in eukaryotes
    123200472
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123200472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123200472
   03009 Ribosome biogenesis [BR:minc03009]
    123200472
   03016 Transfer RNA biogenesis [BR:minc03016]
    123200472
   03036 Chromosome and associated proteins [BR:minc03036]
    123200472
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:minc04147]
    123200472
   04031 GTP-binding proteins [BR:minc04031]
    123200472
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     123200472
Ribosome biogenesis [BR:minc03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    123200472
  Pre-60S particles
    123200472
Transfer RNA biogenesis [BR:minc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    123200472
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     123200472
   Spindle formation proteins
    123200472
Exosome [BR:minc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123200472
GTP-binding proteins [BR:minc04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    123200472
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 123200472
NCBI-ProteinID: XP_044471603
LinkDB
Position
17:complement(2398164..2434532)
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
ESPALAPPEVHIDLAAQQQHEAELAAAAIQPLPDDDDDAFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggccttgccaaatcagcagactgtcgactacccgagcttcaagcttgtaatcgtcggt
gatggaggcactggtaagactacttttgtgaagagacatcttactggggagtttgagaag
aagtatgaacctaccattggtgtggaggttcatccattagatttttttactaattgtggt
aaaatccgtttttactgctgggatactgctgggcaagaaaaatttggtgggctcagagat
ggctactacatccatgggcaatgtgccatcataatgttcgatgttactgctcgcttgaca
tacaagaatgttcctacatggcatcgtgatctgtgccgggtgtgtgagaatatacctatt
gttctctgtggaaacaaggttgatgtgaagaataggcaagttaaggcaaagcaggtcaca
ttccataggaagaagaatctgcagtactatgagatctctgccaagagcaactacaatttt
gagaagcctttcttgtatcttgcccgaaagcttgctggggacccaaatattcactttgtt
gagtctcctgctcttgctcccccagaagtacacatagacttggctgcacagcaacagcat
gaagccgagcttgctgcagcagctattcagcctcttcccgacgatgatgatgacgcgttt
gactag

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