KEGG   Mangifera indica (mango): 123202670
Entry
123202670         CDS       T07684                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
minc  Mangifera indica (mango)
Pathway
minc03018  RNA degradation
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123202670
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123202670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123202670
   03041 Spliceosome [BR:minc03041]
    123202670
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123202670
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     123202670
Spliceosome [BR:minc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    123202670
 Complex C
  U2 snRNP components
    123202670
SSDB
Motif
Pfam: LSM TIG_SUH
Other DBs
NCBI-GeneID: 123202670
NCBI-ProteinID: XP_044474613
LinkDB
Position
19:6572961..6575076
AA seq 97 aa
MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE
IDDETYEEIVRTTKRNVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgaccgaagaagagagcgccgttaaggagccgttggatctgatcagactcagtctt
gacgagcgtatttacgtgaagctccgatccgaccgtgaactccgtggcaaactccatgct
tatgatcagcatttaaatatgatacttggggatgttgaagaagttgttactaccgttgag
attgatgatgaaacttatgaagagatcgttcggaccacgaagcgcaatgttccatttctc
tttgtaagaggtgatggagtcatactggtctctcctccattaaggacagcttga

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