Mangifera indica (mango): 123216759
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Entry
123216759 CDS
T07684
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123216759
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123216759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123216759
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123216759
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
FabD_helical_ins
Motif
Other DBs
NCBI-GeneID:
123216759
NCBI-ProteinID:
XP_044493255
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Position
5:17829372..17833278
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AA seq
569 aa
AA seq
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MMEENTEMAQRPSLTSMSEKENFELVWENGQLLTRDLPRRAQRNPSCNVHPSIKATFPQR
RARFETLGSILDNSYHDKKNFYMNFTHRNSLEDDNFHESLPEVYQTPVNEFLEQNQGDCL
DKFQQDSQVVPVHKYANLETECHSDYFTETPQLAPTSQPDKSSNKQYRESSPFKRLRGDL
RQNLVAMNEFPVAKLLKQDSDSDGRRATTDFSLFLGSPSLLQVNSLQSELPTRVPAPLSI
AEDLNKNYNRSGPCREIAPANGLKTVNGFHFQPNLMEATVGLLPPGAKPSDNSLPNNESE
AVCREDASPNKVYGQTSNIEANKAKEPVASSSFCSRGASNNPTYTLKRRYDDTEGSAGHP
SQNIERKPKSVTKTVPGSKSKPTNTNKAVSDGKRNRKKLTTEFHNLSERKRRDKINKKMR
ALRELIPNCNKVDKASMLDEAIEYLKGLQLQVQMMRMGNRVCMPPMVFPNGLQQLHQQMA
HFSSMRMQMGVGCNPYAPPFFFPPIPGATMPQLLPVSILPAQFGLGLLNTAVRLPGVSLA
SAPTQLMASATLSNSKDSIHNNTLEEREN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagagaacactgaaatggctcagcgacctagtttaacttccatgtctgagaag
gaaaattttgagctggtatgggaaaatggccaacttcttacacgagatttacccaggaga
gctcaacggaacccctcatgcaacgttcatccttcgatcaaggctacctttcctcaaagg
agggcaaggtttgagactttaggttccatcttagataactcttatcatgataagaaaaac
ttttatatgaattttactcacagaaattctctagaagatgataacttccatgaatcatta
cccgaagtgtatcaaacccctgttaatgagtttttggaacaaaatcaaggtgattgtttg
gataagtttcaacaggactcccaagttgttcccgtacataaatatgcaaatttagaaacg
gagtgtcactctgattatttcactgaaactcctcaacttgccccaacaagccaacctgat
aagtcctccaataagcaataccgagagtcatctccattcaaaaggctaaggggggattta
agacaaaatctagtagcaatgaatgaattccctgtcgcaaagttgctgaagcaagattca
gactctgatgggagaagggcgacgactgacttttctcttttcttaggatctccaagtctt
cttcaagttaacagtctgcagagtgaactacccacaagggttcctgcacctttatcaatt
gcagaggatttgaataaaaattataacaggtctggtccatgtagggaaattgctccagca
aatggtttaaaaactgtcaacggttttcattttcaacccaatttaatggaagccactgtc
gggctgttgccaccaggtgctaagccttcagataattctctcccaaataacgaatctgaa
gctgtttgtcgtgaggatgcttcccccaataaagtttatggccaaacctcgaacatagaa
gcaaacaaagccaaggaaccagtggcatcttcttcattttgctcacgtggagcttcaaat
aatccaacttacactctaaagaggagatacgacgataccgagggatcagctggtcatccg
agtcaaaatattgagagaaaaccaaagagtgtgacaaaaacagtacctggaagcaaaagc
aaaccaacaaatacgaacaaagcagtttctgatggcaaaaggaataggaaaaagctaact
acagagtttcataatttatccgaaaggaagcgaagagataaaatcaataaaaagatgcgt
gcactacgggagctgatacccaattgcaataaggtagacaaagcttcgatgcttgatgag
gccattgagtatctaaaagggcttcagcttcaagtgcagatgatgcgtatgggaaatagg
gtgtgtatgcctccaatggtgtttcctaatggattgcaacaactacaccaacaaatggct
catttctcttccatgagaatgcagatgggtgttggctgcaacccatacgcaccacccttc
ttctttccaccaattccaggagctactatgcctcaactgttacccgtctctatattacct
gcacaatttggtttgggccttctcaacacagctgttaggttgcctggtgtctctcttgct
tctgctccaacccaactcatggcttctgctaccctctctaattcaaaggattccatccac
aacaatactttagaagagagagagaactaa
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