Mangifera indica (mango): 123217404
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Entry
123217404 CDS
T07684
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123217404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123217404
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123217404
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
123217404
NCBI-ProteinID:
XP_044494362
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Position
5:15399993..15404411
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AA seq
539 aa
AA seq
DB search
MNPCIPDWNFEGDPPVTDQKKPIGRPEHDLVELLWQNGQVVLNSQTYRKPSLNPNEFRQV
QKQTLRERGSYGNSSNLIQDDETISWIQYPLEDSFEKDVSNFFSELSPSRMEAGKNTIRF
GDEKLVKFGASGVATNSQPTNVTNPVFPGMNRNAMPPPRFEFHDAAQKDKNLGGFGEVVN
ICQTTAPLKGEQRYSNGQFVHKGTGTMTNGEVRDPSMMTVGTSHCGSNQVAYDLDISRAS
SNGAGTTGISPGNLNTDVQRVISQSERGKAETLEPTVTSSSGGSGSSFNRTSKQSTGVIS
HKRKSRDAGESECQSDAAELDSAEGNKSSQKSGSSRRSRAAEVHNLSERRRRDRINEKMR
ALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVFQVMWMGSGMAQMMFPGVQHYMSRMG
MGMGPTSLPSITSPVHLSRVPLVDQSMAIAQAQNQAVMCQNSMLNPVSFQNQMQNANFSD
QCAHYMGFHPMQTTSQPINMFRFGSPTVQSQVTSPPSTSHGPFMAGAATDNTSLSGKTG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatgtataccagattggaattttgaaggtgatccccccgtcaccgatcagaag
aaacccatcggcaggccagaacatgaccttgtagagctcttatggcaaaatgggcaggta
gttttgaacagtcaaacatataggaaaccaagtttaaatcctaatgagtttagacaagtc
caaaaacaaactttacgggaacgtggatcatatgggaattcaagtaatttgattcaagat
gatgaaacaatctcatggattcaatacccgcttgaagattccttcgagaaagacgtctcc
aattttttctcagaattgtcacctagtcggatggaggccggtaagaatacgataagattt
ggagacgaaaagttggttaaatttggtgcttcaggtgtggccacaaattcacaaccaacc
aatgttaccaatccggttttccctggaatgaataggaatgcaatgcctcctccaagattt
gaattccatgatgcagcccagaaagataaaaatttaggtggctttggagaagttgttaat
atttgtcaaaccacagctcccttaaagggcgaacaaagatattctaatggacaatttgtt
cacaaagggactggaactatgacaaatggggaggtcagggatccttcgatgatgacagtt
gggacaagccattgtggtagcaatcaagttgcatatgatcttgatatcagccgagcttcc
agcaatggtgcgggtactacaggtatatctcctggaaatttaaacactgatgttcagaga
gtaatttctcaaagtgagaggggcaaagctgagacacttgaaccaactgttacttcatct
tctggtggatctggcagtagttttaatagaacaagcaagcaatctactggggttattagc
cacaagaggaagagcagagatgcaggggaatctgagtgccaaagtgatgcagctgaactt
gattcagctgaagggaacaaatcatcgcaaaaatctgggtcttcccgcaggagtcgtgct
gctgaagtgcataacctctcagaaaggagacgaagggataggatcaatgaaaaaatgagg
gcattgcaagagctaataccccactgcaacaagacagataaagcctcaatgctagatgag
gcaattgagtacttgaagtctttacagttacaacttcaggtttttcaggttatgtggatg
ggaagtggtatggcccaaatgatgtttccaggcgttcagcattatatgtctcgcatgggt
atgggaatgggtccaacatcattgccatctatcaccagtcctgtgcatttgtctagggtc
cccctagttgatcaatccatggctattgcccaagcacaaaatcaggctgtaatgtgtcaa
aattcgatgttgaatccggtcagtttccaaaatcagatgcaaaatgcaaacttctctgat
caatgtgcccattatatgggttttcatcctatgcaaacaacctctcagcctatcaatatg
tttagatttggttctccgacagtgcaaagtcaagtaacgtcaccgcctagcactagtcat
ggacctttcatggcaggagctgcaacagataatacctctctaagtggcaagacaggttaa
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