Mangifera indica (mango): 123217890
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Entry
123217890 CDS
T07684
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123217890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123217890
03041 Spliceosome [BR:
minc03041
]
123217890
03032 DNA replication proteins [BR:
minc03032
]
123217890
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
123217890
Spliceosome [BR:
minc03041
]
Complex A
U1 snRNP components
Sm proteins
123217890
U2 snRNP components
123217890
Complex B
U1 snRNP components
123217890
U4/U6.U5 tri-snRNP components
123217890
Complex C
U2 snRNP components
123217890
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
123217890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123217890
NCBI-ProteinID:
XP_044494897
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All DBs
Position
6:11819538..11821931
Genome browser
AA seq
280 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDTEEFRKLPPAKGKKNN
NNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSASAIAGPGIGRAAGRGVPT
GPLVQAQPGLAGPIRGVGGPAPAMMQPQIARPPVSYPPAAPPVIRPPGQIPPPGMFPGQA
PPPMARGPPQQVPPPFGVRPPHQQFPMPPQQFAGQRPMVPPPPGPMMRGPPAPPPGRPGM
PNAAPPRPGMPPPPGASIPAFAPPRPGMPPPPGNPPQQQQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttcaaagatgcttcaattcataaactaccggatgcgcgtgacc
atccaagacggtcgccagctgattggaaaattcatggccttcgaccgtcacatgaacctc
gtcctcggagacactgaagagtttcgtaagcttcccccagctaagggcaagaaaaataac
aacaatgaggaacgcgaggaccgtcgcactttaggtctcgtccttctcaggggtgaagaa
gtcatttccatgaccgttgaaggccctccgcctcctgaagagtctcgtgccaaggctgtc
tccgcctctgctattgctggtcccggtattggccgtgctgctggccgcggagtgcccact
ggaccgctcgtccaagcacagccgggtcttgctggacccattcgtggcgttggcggtcct
gctcctgctatgatgcagccacagatcgcgaggccaccggtcagttaccctccggctgcc
ccacccgtcattcgtccgcctggtcagattcctccacctggtatgtttccaggacaggct
ccaccacccatggcacggggcccacctcagcaggtcccaccgccttttggggttaggccg
ccacaccagcagtttcctatgcctccacaacagtttgcaggtcagagaccgatggtgcca
cctccacctgggcctatgatgagaggacctcctgctcctccgccaggtcgaccgggaatg
cccaatgcagctccgccacgtcctggaatgcctccaccacctggtgcttcaattcctgct
tttgcacctcctcgtcctgggatgccaccccctccgggaaaccctccacagcagcaacag
tga
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