Mangifera indica (mango): 123222501
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Entry
123222501 CDS
T07684
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123222501
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123222501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123222501
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123222501
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
123222501
NCBI-ProteinID:
XP_044501248
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Position
8:complement(2589504..2593617)
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AA seq
544 aa
AA seq
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MTEGNTEMAQPPNLTSMNDKEFFELVWENGQLLMRDLSRRAQRNPSCNGHPSDKAQVHVK
NRGDRFENLDNPYHDKRNLYMNFNYNNCLEDDNFHESLPEVYQTHLYESLEQNKGDSSVK
YHKESQVVPEYANLRRKTKSSTKQYRESPPFKRPRANSRKNLVTVHEFPMAKLQEQDLRS
GGKRATTNFSPSLGSPALLQVHSQWTGPASAEDSNNNCKRSSPCGNVDPIPIADQPNLME
TTVELLPPGAKPADKLLPDNESEAVRREYASPNQIYGQTLNIAANKGNEKLTNTQEAIEL
PVASSSLCSGGASNNPTYTLKRRYDDSEGSADHPSQMQNVGRKAKSGTKAVPGSKNKAKS
MTKTSKRNRKKRTAEFHNLSERKRRDKINKKMRALQELIPNCNKVDKASMLDEAIEYLKI
LQLRVQMMSMGNRVSVPQMALPNGMQQTSSQPQLTHVSPMRMHMGIGCNPFPVPPNFLFP
PIPRAAAVPGFSPQLLPMSLLPAQLGLLNTSVSLPGVSLASAPTQLKASATLSNSKDSIH
NIIS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaggcaacactgaaatggcccagccacctaatttaacttcaatgaatgataaa
gaattttttgagctggtttgggaaaatggtcaacttctgatgagagatttgtccaggaga
gcccaaaggaatccctcatgcaatggtcatccttctgataaggctcaagtacacgttaaa
aataggggagacaggtttgagaatttggataatccttatcatgataaaagaaacttatat
atgaatttcaattacaataattgcctggaagatgataatttccatgaatcattacctgaa
gtttatcaaacgcatctttacgagtctttggaacaaaataaaggggatagctctgttaag
tatcacaaggaatcccaagttgttcccgaatatgcaaatttaagaaggaaaaccaagtcc
tccacgaagcaataccgagagtcacctccgttcaaaaggccaagggcgaattcaagaaaa
aatcttgtaacagtacatgaattccccatggcaaagttgcaggagcaagacttaagatct
ggtgggaaacgggcgacgactaacttttctccttccttaggatctccggctcttcttcaa
gttcacagtcagtggactggtcctgcaagtgcagaggattcgaataacaattgtaagagg
tctagtccatgtggtaacgttgacccgatcccgattgctgatcaacccaatttaatggaa
acgactgttgagctgttaccaccgggtgctaagcctgcagataagttgctcccagataac
gaatctgaagctgtacgtcgcgagtatgcttctccaaatcaaatttatggccaaacctta
aacatagcagcaaataaaggcaacgaaaagctaactaatactcaagaggctatagaatta
ccggtggcatcttcttcgttatgctcaggtggagcttcaaataatcccacatacacttta
aagaggagatacgacgatagcgaggggtcagccgatcatccgagccaaatgcagaatgtt
gggagaaaagcaaagagtgggacaaaagcagtgcctggaagcaaaaacaaagcaaaaagt
atgaccaaaacaagcaaacgtaataggaaaaagcgaactgcagaatttcataatttgtct
gaaaggaagcgaagagataaaatcaataagaagatgcgtgccttacaggagctcataccc
aattgtaataaggtggacaaagcttctatgcttgatgaggccattgagtatttaaaaatt
cttcagcttcgagttcagatgatgagtatgggaaatagggttagtgtgcctcaaatggcg
ttgcctaatggaatgcaacaaacaagctcacaaccacaattgactcatgtctctcccatg
agaatgcacatgggtattggctgcaatccattcccagtcccaccaaatttcttgtttcca
ccaattccacgagctgctgctgtgcctgggttctcgccacaacttctacccatgtctcta
ttacctgcacaattgggccttctcaacacaagtgtaagcttgcctggcgtctctcttgct
tctgctccaacccaactcaaggcttctgccaccttatctaattcaaaagattccattcac
aacattatttcttaa
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